KEGG   Corvus cornix (hooded crow): 104696102
Entry
104696102         CDS       T03546                                 
Symbol
LRP6
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6
  KO
K03068  low density lipoprotein receptor-related protein 5/6
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04150  mTOR signaling pathway
ccw04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    104696102 (LRP6)
   04150 mTOR signaling pathway
    104696102 (LRP6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104696102 (LRP6)
Membrane trafficking [BR:ccw04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    104696102 (LRP6)
SSDB
Motif
Pfam: Ldl_recept_b FXa_inhibition Ldl_recept_a Vgb_lyase DUF5050 EGF_LRP2 SGL cEGF EGF
Other DBs
NCBI-GeneID: 104696102
NCBI-ProteinID: XP_039426588
LinkDB
Position
1A:64778466..64901086
AA seq 1612 aa
MGAVLRSLLACSFCSLMRAAPLLLYANRRDLRLVDAAHGKENATVIVGGLEDAAAVDFVF
LKGLIYWSDVSEEAIKRTEFNKSGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSIIVNTD
IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACSKYSGEDLREIHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMS
PTKPSYQCACPTGVKLLENGKTCKDGATALLLLARRTDLRRISLDTPDFTDIVLPLEDIR
HAIAIDFDPLEGYIYWTDDEVRAIRRSFLDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RIVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTL
LEDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGGCS
HLCLYRPQGLRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDSQFQCESGQCIDSALRCNGEANCQDNSDEK
NCEVLCLTDQFRCASGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRLPAAAAKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq 4839 nt   +upstreamnt  +downstreamnt
atgggggccgtcctgcgcagcctactcgcctgcagtttttgttccctgatgcgagctgcc
ccgctgctgctgtacgcgaaccgccgggatctgcggctggtggacgctgcccatggcaag
gagaacgctacggtgatcgtggggggcctggaggacgcggccgccgtggacttcgtgttc
ctcaagggcttgatttactggagtgatgtcagcgaggaagccatcaaacggacagagttc
aataaatccgggagtgtacaaaacgtggtcgtttctggacttctgtcgcccgacgggctg
gcctgtgactggctgggggagaagttgtactggacggattcggaaacaaatcggattgag
gtttctaacttagatgggtcactgaggaaagttttgttttggcaagaattggatcaaccc
agagcaatcgccttggatcctgcaagagggttcatgtactggacagactggggagaagtg
ccaaagatagaaagagctgggatggatggttcaagccgctccattattgttaacacggac
atatattggccaaatggactgacattggattatgaggaacagaaactctactgggcagat
gctaaactgaatttcatccacaaatcaaatctggatggaagtcataggcaagcagtggtt
aaaggctcccttccacatccctttgctttgacactgttcggggacacgttgtactggact
gactggaacacgcattcgatcttggcctgcagcaagtactccggggaggacctgcgtgag
atacattccaacatcttctctcccatggatatccatgccttcagccagaagaggcagcca
aatgctacaaacccatgtggaattaataatggtggctgctcccacttgtgtttgatgtct
cctaccaagccctcttatcagtgtgcatgtcccactggtgtgaaacttctcgagaatgga
aagacctgcaaagatggtgccactgcattgctgctcctggcccgccggacagacctgagg
cgcatttccttggacacccccgatttcacggacatcgtgctcccgctggaggacatccgc
cacgccatcgccatcgacttcgaccctctggaaggatacatctactggacggacgacgaa
gtgagggccatccgccgctccttcctcgacggctcgggcagccagtttgtggtcaccgct
cagattgcacaccctgatggcatcgccgtggactgggtggcccggaacctgtactggacg
gacaccggcacggaccgcatcgaagtcaccaggcttaatgggaccatgaggaaaatcttg
atatcagaagacctggaagaacccagagctattgtactggatcccatggttgggtacatg
tactggactgactggggagaaatcccaaagattgagagggcagcactggatggctcagac
agaattgtgctggtgaacacctcgcttggctggccaaatggattggcactggattatgca
gaaagcaaaatatactggggagacgccaaaacagacaaaatagaggtcatgaatgctgat
ggaactggtaggagagtcctggtggaggacaagctgcctcatatatttggattcactctg
ttggaagactacatttactggacagactggcaaaggcgcagcattgagcgtgtgcacaag
cgcacggcagagagagagatcatcatcgatcagctgcccgatctgatgggcctgaaagcc
accaacgtgcaccagatcatcggtacaaacccctgtgcagaagacaacggcggctgcagc
cacctgtgtctgtaccgaccacaaggccttcgctgcgcctgccccatcggcctggagctc
atcagtgacatgaggacctgcatcgtgccagaagctttcctgctcttttctaggagagca
gacatcagacgcatctctctagaaaccaacaataacaatgttgctattccactcactgga
gtcaaggaagcctctgctctggattttgatgtgacagacaatcgcatttactggactgac
atttctttaaagaccatcagcagagcgttcatgaatggcagcgcgctggaacacgttgtg
gagttcggcttggattatcccgagggcatggctgtggactggctggggaagaacttgtac
tgggctgacactggcacaaaccggatcgaggtgtccaagctggacgggcagcaccgccag
gtgctcgtgtggaaagatctcgacagtccccgggcactggcactggaccctgctgagggg
ttcatgtactggactgagtggggtggcaagccaaagattgacagagctgcaatggatggc
agtgagaggaccacgctggtcccaaatgtgggacgtgctaatggcctgaccattgactat
gccaagaggcggctgtactggaccgacctggacaccaacctgatagagtcctccaacatg
ttgggccttgaccgtgagatcatagctgatgatttgcctcacccctttggcctgacccag
taccaggattacatttactggacagactggagccggcgcagcatcgagcgagccaacaag
accagtggccagaaccgaaccatcatccaggggcacttggattacgttatggacatcctg
gtattccactcctccaggcaggcgggctggaacgagtgtgcctccagcaatggtcactgc
tctcacctgtgcctggcagtccccgtgggagggtttgtctgtggctgcccagctcattat
tccttgaactccgacaacaggacctgcagtgctcctaccacctttctgttgttcagtcag
aagaacgcgattaatcgcatggtgatagatgagcagcagagcccagatatcatactcccc
atccacagtctccgcaatgtccgagccattgattacgaccccctggataagcagctgtac
tggatcgactctcggcagaacatcatccgcaaggcacaggaagatggcagccagagcctc
actgttgtgacaagtccagttcccaatcagaacctggatatgcagccctacgacctgagc
attgacatctacagccgctacatctactggacctgtgaggctaccaacgtcatcaacgtg
acacgcctggatgggagacccatgggagtggtgctcaagggggatcaggataggcccaga
gccattgtggtgaatccagagaaaggatacatgtatttcaccaacctccaggagaggtct
cctaaaattgagagagcagcattggatggaactgagcgagaagtcctttttttcagcggt
ttgagcaagcccatcgccttagccattgacagccagctgggcaagttgttctgggctgac
tcagatctgcgcagaattgaaagcagtgacctttcaggtgctaaccggattgttttggaa
gactccaatatcttgcagcctgtgggactaactgtatttgagaactggctgtactggatt
gacaggcagcagcagatgattgaaaagattgatatgaccggtcgagaaggacgtacaaag
gtccaggctcgtattgcgcaactcagtgacatccatgctgtgaaggaactcaacctgcag
gagtacagacaacatccttgctctcaagataatggtggctgctcccacatttgcattgtg
aagggggacggcaccacacgctgctcttgccccgtgcacctggtgctgctgcaggatgaa
ctgtcctgtggagaaccaccaacatgctcccctcagcagttcacctgtttcacaggtgag
attgactgcatcccggtggcctggcgctgtgatgggttcactgagtgtgaagaccacagt
gacgagaagaactgcccggtgtgctctgacagccagttccagtgtgagagtggacagtgc
atagacagtgccctgcgctgcaatggggaagcaaattgtcaggacaactcggacgagaag
aactgcgaagtgctgtgtttaacggatcagttccgctgtgccagtgggcagtgcattggg
aaaagcaagaagtgtgatcacaacctggactgcagtgacagctccgatgagcaaggatgc
tacacaacggaggaacctgcaccacagcccaacaacaccataggctccatcattggtgtg
atccttacagtcttcgtggtgggagcaatgtacttcatctgccagagagtgctgtgccca
cgcatgaagggggatggggaaaccatgaccaatgattatgtggtgcacgggccagcctcg
gtgcctctgggctatgtgcctcaccccagctctctgtcagggtctctccctggtatgtct
cgaggtaaatctgtcatcagctccctcagcattatgggagggagcagtggcccaccctat
gacagggcccacgttactggagcctcctccagtagttcttcaagtaccaaaggcacttac
tttcctccaattttgaacccgccaccatcaccagctactgaacgttcacactataccatg
gaatttggttattcttcaaacagcccatccactcatagatcctacagctaccggccctac
agctaccggcacttcgcgccgcccacgacgccctgcagcacggacgtgtgcgacagcgac
tacgccccgagccgccggctccccgcggccgccgccaagggctacaccagcgacctcaac
tacgactcggagccggtgccgccgccgcccacgccgcgcagccagtacctgtcggccgag
gagaactgcgagagctgcccgccgtccccgtacaccgagcgcagctactcgcaccacctg
tacccgccgccgccgtccccctgcaccgactcctcctga

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