Corvus cornix (hooded crow): 104696102
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Entry
104696102 CDS
T03546
Symbol
LRP6
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04150
mTOR signaling pathway
ccw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104696102 (LRP6)
04150 mTOR signaling pathway
104696102 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104696102 (LRP6)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104696102 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
104696102
NCBI-ProteinID:
XP_039426588
LinkDB
All DBs
Position
1A:64778466..64901086
Genome browser
AA seq
1612 aa
AA seq
DB search
MGAVLRSLLACSFCSLMRAAPLLLYANRRDLRLVDAAHGKENATVIVGGLEDAAAVDFVF
LKGLIYWSDVSEEAIKRTEFNKSGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSIIVNTD
IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACSKYSGEDLREIHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMS
PTKPSYQCACPTGVKLLENGKTCKDGATALLLLARRTDLRRISLDTPDFTDIVLPLEDIR
HAIAIDFDPLEGYIYWTDDEVRAIRRSFLDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RIVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTL
LEDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGGCS
HLCLYRPQGLRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDSQFQCESGQCIDSALRCNGEANCQDNSDEK
NCEVLCLTDQFRCASGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRLPAAAAKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtcctgcgcagcctactcgcctgcagtttttgttccctgatgcgagctgcc
ccgctgctgctgtacgcgaaccgccgggatctgcggctggtggacgctgcccatggcaag
gagaacgctacggtgatcgtggggggcctggaggacgcggccgccgtggacttcgtgttc
ctcaagggcttgatttactggagtgatgtcagcgaggaagccatcaaacggacagagttc
aataaatccgggagtgtacaaaacgtggtcgtttctggacttctgtcgcccgacgggctg
gcctgtgactggctgggggagaagttgtactggacggattcggaaacaaatcggattgag
gtttctaacttagatgggtcactgaggaaagttttgttttggcaagaattggatcaaccc
agagcaatcgccttggatcctgcaagagggttcatgtactggacagactggggagaagtg
ccaaagatagaaagagctgggatggatggttcaagccgctccattattgttaacacggac
atatattggccaaatggactgacattggattatgaggaacagaaactctactgggcagat
gctaaactgaatttcatccacaaatcaaatctggatggaagtcataggcaagcagtggtt
aaaggctcccttccacatccctttgctttgacactgttcggggacacgttgtactggact
gactggaacacgcattcgatcttggcctgcagcaagtactccggggaggacctgcgtgag
atacattccaacatcttctctcccatggatatccatgccttcagccagaagaggcagcca
aatgctacaaacccatgtggaattaataatggtggctgctcccacttgtgtttgatgtct
cctaccaagccctcttatcagtgtgcatgtcccactggtgtgaaacttctcgagaatgga
aagacctgcaaagatggtgccactgcattgctgctcctggcccgccggacagacctgagg
cgcatttccttggacacccccgatttcacggacatcgtgctcccgctggaggacatccgc
cacgccatcgccatcgacttcgaccctctggaaggatacatctactggacggacgacgaa
gtgagggccatccgccgctccttcctcgacggctcgggcagccagtttgtggtcaccgct
cagattgcacaccctgatggcatcgccgtggactgggtggcccggaacctgtactggacg
gacaccggcacggaccgcatcgaagtcaccaggcttaatgggaccatgaggaaaatcttg
atatcagaagacctggaagaacccagagctattgtactggatcccatggttgggtacatg
tactggactgactggggagaaatcccaaagattgagagggcagcactggatggctcagac
agaattgtgctggtgaacacctcgcttggctggccaaatggattggcactggattatgca
gaaagcaaaatatactggggagacgccaaaacagacaaaatagaggtcatgaatgctgat
ggaactggtaggagagtcctggtggaggacaagctgcctcatatatttggattcactctg
ttggaagactacatttactggacagactggcaaaggcgcagcattgagcgtgtgcacaag
cgcacggcagagagagagatcatcatcgatcagctgcccgatctgatgggcctgaaagcc
accaacgtgcaccagatcatcggtacaaacccctgtgcagaagacaacggcggctgcagc
cacctgtgtctgtaccgaccacaaggccttcgctgcgcctgccccatcggcctggagctc
atcagtgacatgaggacctgcatcgtgccagaagctttcctgctcttttctaggagagca
gacatcagacgcatctctctagaaaccaacaataacaatgttgctattccactcactgga
gtcaaggaagcctctgctctggattttgatgtgacagacaatcgcatttactggactgac
atttctttaaagaccatcagcagagcgttcatgaatggcagcgcgctggaacacgttgtg
gagttcggcttggattatcccgagggcatggctgtggactggctggggaagaacttgtac
tgggctgacactggcacaaaccggatcgaggtgtccaagctggacgggcagcaccgccag
gtgctcgtgtggaaagatctcgacagtccccgggcactggcactggaccctgctgagggg
ttcatgtactggactgagtggggtggcaagccaaagattgacagagctgcaatggatggc
agtgagaggaccacgctggtcccaaatgtgggacgtgctaatggcctgaccattgactat
gccaagaggcggctgtactggaccgacctggacaccaacctgatagagtcctccaacatg
ttgggccttgaccgtgagatcatagctgatgatttgcctcacccctttggcctgacccag
taccaggattacatttactggacagactggagccggcgcagcatcgagcgagccaacaag
accagtggccagaaccgaaccatcatccaggggcacttggattacgttatggacatcctg
gtattccactcctccaggcaggcgggctggaacgagtgtgcctccagcaatggtcactgc
tctcacctgtgcctggcagtccccgtgggagggtttgtctgtggctgcccagctcattat
tccttgaactccgacaacaggacctgcagtgctcctaccacctttctgttgttcagtcag
aagaacgcgattaatcgcatggtgatagatgagcagcagagcccagatatcatactcccc
atccacagtctccgcaatgtccgagccattgattacgaccccctggataagcagctgtac
tggatcgactctcggcagaacatcatccgcaaggcacaggaagatggcagccagagcctc
actgttgtgacaagtccagttcccaatcagaacctggatatgcagccctacgacctgagc
attgacatctacagccgctacatctactggacctgtgaggctaccaacgtcatcaacgtg
acacgcctggatgggagacccatgggagtggtgctcaagggggatcaggataggcccaga
gccattgtggtgaatccagagaaaggatacatgtatttcaccaacctccaggagaggtct
cctaaaattgagagagcagcattggatggaactgagcgagaagtcctttttttcagcggt
ttgagcaagcccatcgccttagccattgacagccagctgggcaagttgttctgggctgac
tcagatctgcgcagaattgaaagcagtgacctttcaggtgctaaccggattgttttggaa
gactccaatatcttgcagcctgtgggactaactgtatttgagaactggctgtactggatt
gacaggcagcagcagatgattgaaaagattgatatgaccggtcgagaaggacgtacaaag
gtccaggctcgtattgcgcaactcagtgacatccatgctgtgaaggaactcaacctgcag
gagtacagacaacatccttgctctcaagataatggtggctgctcccacatttgcattgtg
aagggggacggcaccacacgctgctcttgccccgtgcacctggtgctgctgcaggatgaa
ctgtcctgtggagaaccaccaacatgctcccctcagcagttcacctgtttcacaggtgag
attgactgcatcccggtggcctggcgctgtgatgggttcactgagtgtgaagaccacagt
gacgagaagaactgcccggtgtgctctgacagccagttccagtgtgagagtggacagtgc
atagacagtgccctgcgctgcaatggggaagcaaattgtcaggacaactcggacgagaag
aactgcgaagtgctgtgtttaacggatcagttccgctgtgccagtgggcagtgcattggg
aaaagcaagaagtgtgatcacaacctggactgcagtgacagctccgatgagcaaggatgc
tacacaacggaggaacctgcaccacagcccaacaacaccataggctccatcattggtgtg
atccttacagtcttcgtggtgggagcaatgtacttcatctgccagagagtgctgtgccca
cgcatgaagggggatggggaaaccatgaccaatgattatgtggtgcacgggccagcctcg
gtgcctctgggctatgtgcctcaccccagctctctgtcagggtctctccctggtatgtct
cgaggtaaatctgtcatcagctccctcagcattatgggagggagcagtggcccaccctat
gacagggcccacgttactggagcctcctccagtagttcttcaagtaccaaaggcacttac
tttcctccaattttgaacccgccaccatcaccagctactgaacgttcacactataccatg
gaatttggttattcttcaaacagcccatccactcatagatcctacagctaccggccctac
agctaccggcacttcgcgccgcccacgacgccctgcagcacggacgtgtgcgacagcgac
tacgccccgagccgccggctccccgcggccgccgccaagggctacaccagcgacctcaac
tacgactcggagccggtgccgccgccgcccacgccgcgcagccagtacctgtcggccgag
gagaactgcgagagctgcccgccgtccccgtacaccgagcgcagctactcgcaccacctg
tacccgccgccgccgtccccctgcaccgactcctcctga
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