Corvus cornix (hooded crow): 104696161
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Entry
104696161 CDS
T03546
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104696161 (BTAF1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104696161 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
104696161
NCBI-ProteinID:
XP_039410078
LinkDB
All DBs
Position
6:15512235..15556171
Genome browser
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPNEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VLLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVANVVINQPATDSKTLVENAQEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQTQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECTTVAICVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DAHIDIGNRVNCSVFTIDQANELVTSVFNEVTSSFSLNPKVLQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLVQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSHENSKGPNSDKDGMQHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHINNFDRKSLLEKGDAPAQELVNSL
QVFETTAASMDTQLHPLLIQHLPHLYMCLQHPSTAVRHMASRCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTNSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYEIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAREYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISLNEETEKPKLKSTG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAQNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctcttcattttactggacaccggtacaacaccagta
acaagaaaagcagctgcacagcaactcggggaagtagtgaaactgcatcctcatgaactg
aataatctcttatctaaagtgttagtgtacttaagaagtacaaattgggatactcgtatt
gcagctggccaggctgtcgaagccatagtgaaaaatgtacctgagtggaatccaactcca
agatcaaaacaagaaccaggctcagaaagtcctaatgaagattcaccttcaacagatcgg
ttgcgttttgacagatttgatatatgtcggttgttaaaacatggtgcatctcttcttgga
tctgctggtgcagaatttgaagtccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcacgacagaggaaactgctacagaagaaacttggcttagatatgggtgctgca
attggaatgaatactgaggatctgttcaatgatgaagatttggactattctccttcttca
gttttactagtaaacaaacaacctactcttcaggctgctgagttaattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggctaagctatttgca
aagcaaagatccagagatgcagtggaagctaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaagagaagaaaagttgcaaatgttgtcatcaaccaacctgccacagac
tcaaaaacattggtagaaaatgctcaggaagaggcaaatgaatggcctctggaaagtttt
tgtgaagaggtgtgcaatgatctctttaacccttcttgggaggttcgacatggtgccggt
actggactgagagagatacttaaagctcatggtaaaagtggtggtaaaatgggagatagc
tctttagaggagatgattcagcagcatcaggagtggctagaagacttggttattagactt
ctttgtgtgtttgcactagacagatttggagactttgtttcagatgaagtagtagcacca
gtacgtgagacttgtgctcagactttgggagtagtattgaaacacatgaatgaaactggt
gtgcataaaactgtggatgttctcctgaagctgcttacacaggaacagtgggaagtgaga
catggtggtctcctaggaataaagtatgctttggcagtacgtcaggacatgatcaacact
ttattgcctaaagtgttgcctgcaataattgaaggtctgcaagatctggatgatgatgtc
cgagctgttgctgcagcatctttagtaccagtagtggaaagcctggtacaacttcaatct
cagaaggtgccttttattcttaataccttgtgggatgcacttctggagttggatgacttg
acagcttccacaaacagtatcatgatccttctttcatcccttctgacttatcctcaggtc
cgcaaatgcagtattcagcagtccctgacagtgctggtcccacgtgtgtggccattcttg
catcacacaatatcttctgtgcgaaaagcagcactggaaacattattcacactgttgtct
acccaagaccagagttcttcaacatggctgactccaattctgcaagacatgttgaggcac
atatttcagttttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggtg
tggctggaactgttaaacaaggcatctgtacagtatgttgttgcagctgcttgtccatgg
atgggagcctggctctgcctaatgatgcagccatctcatttacccattgacttaaacatg
ttgctggaagtgaaaaccaggtcaaaagaaaaggcaggtgctaaactgcgtcaaggtcaa
acccagaataaggaagtgattcaggaatacattgctggggcagacagcattgcagaagat
ccagcaaccagggattatgttgtcatgcgtgctcggatgatggcagcaaagttgctggga
gcactttgttgctgcatttgtgacccaggtgtaaatactgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttaaattctaaatctgccttgcagagg
attagtgttgcgttagtaatctgtgagtgggcagccttgcagaaggagtgtacaactgtg
gctatttgtgttcagcctcgtttacttggggtcctttctgagcatctctattacgatgaa
attgctgttccttttacacgaatgcaaaatgaatgtaaacaactcatctcattgttagct
gatgcacacattgacatcggaaacagagttaactgcagtgtatttacaatagatcaggct
aatgagctggttacttctgttttcaatgaggtgacatcatcctttagtttgaatcctaaa
gttctgcaacagttggacagtaaacggcagcaagtccaaatgactgttacagaaacaaat
caagaatggcaagtgttgcatctgcgagtccatacttttgctgcatgtgcagttgtgaac
ttgcagcaacttccagagaaactaaatcctgttataaaacccttaatggaagctatcaaa
aaagaagagaatacacttgtacaaaactatgtggcttcatgtatagcaaagttacttcag
cagtgtacaacaaggtctccttgtcccaactcaaagattataaaaaatctctgcaactcc
ctctgtgtggatccacatcttaccccactagcagcatgtcctgcacagcctcagagtagc
catgaaaactcaaaagggcccaactctgataaagatgggatgcagcacacagttactaag
cacaggggaataattacactgtacagacatcagaaggctgcttttgccatcacaagtcga
cgaggtcctactccaaaagctccaaaagcccctattgcagatcttcccacaggcagcagt
ggaagcattcctacagaacttgatgaggctcagaaaccttatgttgtacagagaagagga
gctgaatttgctttatctactatagctaaacattttggtgctgaaatggcaacaggattg
ccacatctctgggatgctatggttggttcgttaaggaacaacattcacataaataatttc
gaccgaaagtcattactggaaaaaggagatgctcctgcccaggagctggtaaattccttg
caggtttttgaaacaacagcagcttcaatggatactcagctacatcctctgttaatacag
catttgcctcatctttacatgtgccttcaacatcccagcactgctgtgagacacatggct
tcccgttgtgtgggtgttatgagcaaaatagcaaccatggaaacaatgaatatctttcta
gagaaggttctaccatggctgggagcaatagatgacaacaccaaacaagaaggtgcaatt
gaagcacttgcctgtgtgatggagcagctggatgttggtattgttccatacattgttctt
ctagtggttccagttctgggtagaatgagtgatcagacaaacagtgtacgttttatggct
actcagtgctttgcaacactgattagactgatgcctcttgaggctggaataccagaccca
ccaaacatgtccgaagaattaatcagaatgaaggctaaagaacgtcactttctggaacaa
ttactggatggaaaaaaactggaaaactatgaaatcccagtaccaatcaaagcagagctc
aggaaataccagcaggatggagtgaactggcttgcatttctcaataaatacaaacttcat
ggaattctttgtgatgacatgggcttaggaaaaactttacaatccatttgcattcttgca
ggtgatcattgcctcagggctcgggaatatgcaagaacaaaactggtggacagtgttcct
cttccctccttggtggtgtgtcctcctacactcacgggacactgggtggatgaagtgggc
aaattctgctcaaaagaatatcttaatccattgcactatacgggacctcctactgagaga
gcaagattgcaacaccaggtgaaaagacacaatctcatagtggcttcatatgatgttgta
agaaatgacattgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaagctgtcaaaagcagtaaaacaactgactgctaat
tacaggataattctttctgggacaccaatccagaacaacgtcttagagttgtggtcgttg
tttgacttcctaatgccaggattcttgggcactgaacgccaatttgcggctcgttatggc
aaaccaatcctggcaagcagagatgcccgaagctccagtcgagaacaagaggctggggtg
cttgcaatggaagcactgcaccgccaagtcctgccatttctgctaaggagaatgaaagag
gatgtgctgcaagatcttccacccaaaattattcaagattattattgtattctcagtcct
ctgcaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
acagtttcttcaatttcactgaatgaagaaactgaaaaaccaaagcttaaatctacaggt
catgtatttcaggcattgcagtacttacggaagctctgcaaccatccagcattagtgctc
acaacccaacatccagaatataaaagaattacagagcaacttgcagctcagaattcatcc
cttcgagatatccaacatgcacctaagttgtctgctttaaaacaactgctacttgactgt
ggtttggggaatggtggatcttcagaaggcggtacagaagctgttgtggcccagcacaga
gtgcttatcttttgtcagctgaagagtatgctggatatagtggagcatgaccttctccga
cctcagttaccttcagttacttacttacgacttgatggcagcatccctgctgggcagaga
cattccattgtttcccggtttaataatgacccatctatagacgtactgttgctcaccact
catgttggtggactaggacttaacctgacaggggctgacacggtcgtatttgtggaacat
gactggaacccaatgagagacctgcaagccatggatcgggcacatcgcattgggcagaaa
cgtgttgttaatgtgtatcgcctgataaccaggggaactctggaagagaagatcatgggt
cttcaaaagttcaaaatgaatattgcaaatacagtgatcagccaagaaaatgcaagccta
cagagcatgggaacagagcagcttcttgatctgttcactcttgacaaggatggaaaaact
gaaaaagcagatacctctacctcttctgggaaagcatcaatgaaatcagtactcgaaaac
cttggagaactgtgggatcaagagcagtatgacactgaatacagtcttgaaaactttatg
cattcattaaagtaa
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integrated database retrieval system
