Corvus cornix (hooded crow): 104696413
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Entry
104696413 CDS
T03546
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104696413 (UTP20)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104696413 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
104696413
NCBI-ProteinID:
XP_010409047
LinkDB
All DBs
Position
1A:46846611..46910495
Genome browser
AA seq
2795 aa
AA seq
DB search
MKSKPSAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNL
TQHFVEFYNEVANKCQSFNQLVYYQSAVVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNALFNLMLCDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAETAMKLVLLKLGPITEEEIELPWVAVGEAFEQMIRSAAVHIHKEHFDIVFKCLEESL
LDLQRKITKVNCSVASEQMERILQAYLILVEHANGSKISLPGDVCQVLIKMLQTPYLSSS
CCKMLLNTISAFLLAENVLLPDSLTKEAIQKVFASGFERHFLLDFSEAMFTMKQFERHFL
PCFLEYTEHCFSGTDAITKDEAVAILAKLILVKAEPPTIGSMAFEKYPLVFTEASVSSNT
RQQTSKRRGEKAEVPVLDHVLSLIHLPEKEDITDLSQSWVALVVLPHIRPMNKDHILPHV
TSFIDSLFTAIDKGSLCKGSLFVACQAVSTLLSLVESAEVLHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSQGNLMDLFEKLHPNISTGVSKVRLLTVRILNHFDNPP
STQIEGEGTGEFQPVFAILLQAELVPATVNDYREKLLHLRKLRCDIVQPAIPSGSLQEVP
LRYLLGMLYVNFSPLWDPVTELITSHAKEMENKQFWKVLYEHLERAATYAEMELQNELDE
QEESTAETESEKIPEGQVGTVFLEQLRSRTNCCERLDHTNYRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRRKTSGTIAAKQMPAEEVNDVAMEEEEEEEEE
KEEGEPISVGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEPKLNALYTQLLSHQDQN
VQRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETAVVKGEHRPDLIPV
LMRILYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGP
CQTAVLQSMSDLDLAKVLPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMTAVVS
CILQQREKVQPRLINPLKNLRRLGLKLVAEFFSDYETYSFSVEEIDAVFHAVVWPQVCRL
ASESQYSPTFLLKLIHTWSKNPRYFPLLAKQQPDHPESDILSNVFAVLSAKNLSEATSSL
VMDIADSLLNSPDFEPTEQVSSLSVTGCVVVVTGEVTEEPLSLGCRLVLPHVPAILQYFS
KTMLSVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTQI
DILETVQNLLRHCSNPTSFLKPLAKLFSVIQNKLSRNKLCLVFQTLSDLDSKLKYITDVV
KLNAFDQRHLDDIDFDVRLAAFQSITAHIKEMQAVDTDFLIAVMHNCFYTIQLGDMALSD
NASLCLTSFIHRLAEISHTEDEYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQT
FPANPEFQDLVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKELTEEKLVLSSKSLQN
YIMPYATTAIFSEKMLKHENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQIGTK
LGVSLLETVLEAFHFDHKTLEKQLVTIDNQEAAAMDLEPVVEAEEAMELEQSEGEEEEVE
EKNGKNLSEKPAEPEQAAEPSENAEQVTKPVSFLPRNKEELECLIKHIQETVTVNILPKL
HRCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKVC
TFLRNRFQEIRDVARNTLIKIMEVLGVHYLLYILKEMRSALIHGYQLHVLTFTVNLLLKG
LTTRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKIMEARKNKSYDSYEILGKF
IGRSQVTKLILPLKETLESTTSLKIVRKVHEALRHIMTGLIFNSDMNAESLLLLSHGLIS
ENLPLLTEKAKKKVTPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLL
HMSLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVVTGALQSLVWILKFPLPSVSTN
MESLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAE
EDIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKYI
LDYPLGDKLKPNLDFMLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLSLCM
MMINDDSAKCKKMAALTCKSLLSKISNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFV
EVNGVMFERRLEAVLTLIEQEINPSKFENITEEEEEKAADRLLFSFLVLVKKLITECNLI
QLTKNSDVVSSIWDHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKERKSGKRK
KTPAQLSASIVFLTAELDKKMKELVFAFCHQLQSKFLDMSLSEQVIKNLLFVAKVVYLLA
PASEEGKEAGGELSCEVEEQEVSEDEKDTSAQGEEEREDTQEKGQPATLLWLMKKLSVMA
KREAAYSPKVPLKRSCIFKFLGAISVDLGQDRIKPYLPTILTPLYRELNSNYAEQDPTLK
NLSQEIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKLKRH
KNKAETRKRKIESLRPMYKAKRHRSHALKDLAMVE
NT seq
8388 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagccctcggcccacaagtcggggaacacgcaccggtttcttaccttttcg
gagcgcctaagcaatattaatatcgatattattcatcggattgaccgaactgggagctat
gctgaggaggttgaaacctactttttcgaaggactgcggaaatggaaggaactgaacctc
actcagcattttgtggaattctacaatgaagtggccaacaaatgccagtccttcaaccag
ctggtttattaccagagtgctgttgtgcagagcttgaagacacatttgcaagtcgaaggc
agtcttgcttaccaacccctattaaatctggtggtgcagctggctcgagatcttcaggct
gacttctatcctcactttcatgacttcttcctggccatcaccaaattactggatacacag
gacacagagctgctagaatgggcttttacctctctttcctatctctacaagtatttgtgg
agattgatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaactccacatcagaaattttgctgctgaaagttttgtctttctgatgagaaaggtt
tctgataaaaatgcactcttcaatttaatgctctgtgacctgggagagcaccccgaaaag
gtggaaggtgtaggacagctgctttttgagatgtgcaagggtgttcgaaacatgttccac
tcctgtgcagagacggctatgaagttagttctgttgaagctgggacctattactgaagaa
gaaattgaactaccatgggtagctgttggagaagcctttgagcaaatgatcagatcagct
gcagtgcatatccataaagagcattttgacattgtcttcaagtgtctggaggagtcactc
ttagatttgcagaggaaaataactaaggtcaactgctctgtggcttcagagcagatggaa
aggattctgcaggcttatctgatcttagtggaacatgcaaatggatccaaaatctccctg
cctggagatgtctgtcaggttttaataaaaatgttacaaacaccctatctctcatcatct
tgctgcaagatgctgctgaacaccatttctgcgttcctgttggctgagaatgttttgttg
ccagattctttgaccaaggaagctattcagaaggtatttgcaagtgggtttgaacggcat
tttcttttggacttctctgaagcaatgttcacaatgaagcaatttgagaggcattttctc
ccatgctttctagaatacactgaacattgcttctctggcacagatgccatcacaaaggac
gaagctgtggcaattctggctaaactcattttggtgaaagcagagcctcctaccattggt
tcaatggcatttgaaaagtatcctcttgttttcactgaagcatctgtcagctctaataca
aggcaacaaacaagtaaaagaagaggagaaaaggcagaagtaccagtgttggatcatgta
ctgtctttaattcatttaccagagaaggaagacatcactgacctttcacagtcttgggtt
gccttggttgtactgccacatattagaccaatgaacaaagaccacattctgcctcatgtg
acaagttttatagactctctcttcacagccattgacaaaggaagcctctgcaaaggaagc
ctgtttgtggcctgccaagctgtaagtactctacttagtttggtggagtctgctgaagta
ctccatttgttacctgtggagcgtgtcaagagcttggtgaccactttcccttcagacccc
tctgcgttgctgttggctgatctctattacacgaggctggcattgtgtggctgccaggaa
cccctttcccaagggaacctaatggacttgtttgagaagttgcatcctaatatttccact
ggtgtttccaaggtccggctgttgactgttcgaattctaaaccattttgataatccacct
tctacgcagattgagggtgaaggcacaggggaattccagccagtatttgccatattgctc
caagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctccatttgagg
aaactaagatgtgacatagtgcagcctgcaataccaagtggatctttgcaggaggtgcct
cttcggtatttactgggaatgctttatgttaacttcagccctctctgggatcctgtaact
gaactcataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcctgtat
gaacatttggagagggctgcaacctatgctgaaatggagctacaaaatgaactagatgaa
caggaggagagcactgctgaaacagaaagtgagaagataccagaaggacaggtggggact
gtctttctggagcagctgaggagtagaacaaattgctgtgaacggctggaccacacaaat
taccgtttcctactgtggaaagcactggataagtttccagacagagtggagcctcggtca
agggaactttccccacttcttttgagattcattcgaaatgagtactacccagcagattcc
ctagtggctccatctcaggatctcagaaggaaaactagtggtaccatagcagcaaaacaa
atgcctgctgaagaggtgaatgatgttgctatggaggaagaggaggaggaggaggaagaa
aaggaagaaggggaaccaattagtgtaggactaccaaaaaagaaaacaagaagagctgct
gctaagcaactaatagcccacttacaagttttctcaaaattctcaaatcctcgtgcattg
tatctggagcctaagttgaatgccttgtatacccagttactgtctcatcaagaccagaat
gttcagagaatagctcttgactgtataatgacatacaagcatcctcatctactaccatac
agggagaacctgcaaaggctactggaggacaagagctttaaagaagagatagtccatttc
agtatttctgaggagaccgcagtagtaaaaggagagcatcgaccagatctcatccctgtt
cttatgagaattctctatggcagaatgagaaacaaaacagggagcaaaacacagggcaag
tcttcagcgagcactcgcatgtcaattgttctgcgatttctggccggctcactgccagaa
gagatacggatgttcttggatctactctttgaagctgtgaagcaattcagtaatgggcct
tgccagactgcagtccttcaaagtatgtcagacctggatttagctaaagtcctgcctctt
gggcgtcagcatagcctcttcaatggtcttgaagttgtgttgaaaaacatgggacatttg
atccagcaatatctgcctgaaattctacagattctgctctgcatgactgctgtggtatcc
tgcatcctccagcaaagagagaaggtccaacctaggttgattaatccactgaagaatttg
agacgtcttggtctcaagcttgtggcagagtttttttctgattatgagacctacagcttt
agtgtggaagagattgatgcagttttccatgctgtggtatggcctcaggtctgcagattg
gcttcagagagtcagtattctccaactttcctgctcaaactcattcacacctggagtaag
aaccccagatatttccctttactggccaagcagcagccagatcacccagagagtgatata
ctgtcaaatgtatttgctgtgctgtcagccaagaatctgtctgaggccacatccagtctt
gtgatggacatcgctgatagccttctcaacagcccagattttgaacccacggagcaggtt
tccagtttgagtgtgactggctgtgttgtcgtggtcactggagaggtgacagaagagccc
ctcagtctaggttgccggttggtcctgcctcatgttcctgccatacttcagtacttcagc
aaaacaatgttaagtgtggaaaaggtgaaaaagaagaagtatagagctcaagtcagcaaa
gagctgagtatactttccaagatcagcaaatttatacaagagaagagtcagaattcagtg
cttgtgagccttctcctccctttcctttatcagagtaacatggagcagggtacacaaatt
gacatcctggagacagtgcagaacttgctgaggcattgctcaaaccctacaagctttctc
aaaccactggcaaagcttttttctgtcatccagaacaaactgtctcgaaataagttgtgc
ttggtatttcagactttatctgacttggacagtaagttgaagtatattactgatgttgtt
aagctgaatgcctttgatcagcgacatctggatgatatcgacttcgatgtgcgtctggca
gcatttcagtcaatcacagcccacatcaaggaaatgcaagcagtggatactgacttcctc
attgctgttatgcacaactgcttctataccatccagcttggagatatggctcttagtgac
aacgcaagcctttgcttgaccagtttcatccaccgactggcagaaatcagccacacagaa
gatgagtacaaggagctaatccagcacactctcctggagtctgtgagaaggggtctgaag
agtaagactgagagcatccagcaggactacacgtcgctgctttcctgcctcattcagaca
ttcccagcaaatcccgaattccaggatttggtccagctgaccaaccgccatgatcctgac
atggacttctttgagaacatgaaacacatgcagatccacaggagggcacgagctctgagg
aaactggcaaaggaactcactgaagaaaagcttgtgctgtcttctaaatccctccagaac
tatatcatgccttatgctacaactgccatttttagtgaaaaaatgcttaagcatgaaaat
atggtaacagcctcagttgaagttgttggagctgtctgcagacatctttcatggtcagca
tatttgtaccacttaaagcatttcatccatgtcttgcaaacaggacagatcggtacgaag
ctgggagtcagcttgttagagacagtgctggaagcctttcactttgaccataaaacactt
gaaaagcagcttgtgaccattgacaaccaagaagctgctgccatggaccttgagccagtg
gtggaggctgaagaagccatggagctggagcagagtgaaggggaagaggaggaagttgaa
gaaaagaatgggaagaatctctctgagaagccagcagaacctgagcaagcagctgagcca
tctgaaaatgctgaacaagtgaccaaacctgtttcattcttaccccgaaataaagaggag
ctggagtgtctgatcaaacacattcaagaaacagttacagtcaacatcttgcctaaattg
cacaggtgtattgttgcaaaggttaaaagagacgaggagcacaagcttgtgaaatccaat
gttgtgaatgatgatgaggtggttcgtgttccattagcttttgcaatggtcagaatgatg
cagtgtctcccccaagaagtgatggaagctaacctaccgagcatcctgctgaaagtctgc
acgtttctgagaaacagatttcaggaaatacgggacgttgcccgtaacaccctcattaaa
atcatggaagtgttgggagtgcactaccttctgtatatcttaaaggagatgaggtctgcg
ctcatccatgggtaccagctccatgtgctgactttcactgtgaacctgttactgaagggc
cttactaccaggctcagcgctggtgatttggacccctgcttagatatcctgattgagatt
ttcaaccaagagttgtttgggaatgtagctgaagagaaagaagtgaagggaattgtctcc
aaaatcatggaagcccgcaaaaacaagagttacgattcctatgaaattcttggaaagttc
ataggaaggagccaggtgacaaaacttattctgccactgaaagagactcttgagagcact
acaagcttgaagatagtccggaaggtgcatgaggcactgcgtcacatcatgacagggctg
attttcaactcagacatgaatgcagaatccctcctcctcctcagtcatggtctcatcagt
gaaaatttgcctctgctcactgagaaggccaagaagaaagttacccctcctccagatcct
cggctgcaaccagagagctgcctgctgctccagcccactcccacaagaggagggcagaaa
gcacgtgtcagcagcaggactaacacatatatcctggtggattcaggacttcggctactg
cacatgagcctgaagaggtccaaagtaaattcttctgaggaacatgctttggaaatgtta
gacccttttgttcagctgcttatagactgcctgaaatctatggatgtcaaggtggtaact
ggcgctctgcagtccttggtatggattttaaagttccctttgccttctgtcagtacgaat
atggagtcactgatcaagcagcttttcctcttgctgaaagagtttgccaagacagggata
gccaaaggccagaatttccaccttgttgtgagctgtttcaaatgtgttacaatacttgtg
aagaatgcaaagagtcagataacaagcaaacagctccaagtgttgcttggctttgctgaa
gaagacatttatgattcatcacgccaagccactgcctttggccttctcaaggctatttta
tccaggaagctgattgtccctgaaattgatgatgtgctgcagaaggttgcccagctggcc
atcacgggtcagagtgagccagtgcgagtccagtgcaggcagatttacttaaaatacatt
ctggactacccccttggtgacaaactgaaacccaatttggatttcatgcttgcacagctg
gagtatgagtatgaaactggtagggaatcggcactggagatgattgcatacctcctcgac
atgttcccacaggatctcctgcacaaatactgtgggctgtttttcctctctctttgtatg
atgatgataaatgatgactcagccaaatgcaaaaagatggcagctttgacatgtaaatct
cttctcagtaagatcagcaatgaaaaacaagatctgatgttttcgctggtcacagagtgg
tttcacagcaaaaagagctcacacaggaggttggctgcccaggcatgtggtttgtttgtt
gaagtgaacggagtaatgtttgagcggcggcttgaagcagtcctcactttgattgaacaa
gaaatcaacccaagtaaatttgaaaatataactgaagaggaagaggagaaggctgcagat
aggctgctattcagctttcttgtgctggtaaaaaagctaatcacagagtgcaacttgatt
caattaaccaagaacagtgatgttgtgagcagtatctgggatcatgtccagtctcacctg
tggtatcctcatagctgggtctggctgacagccactgagatctttggcttgttgtttgca
tcttataagccagaagatcttgtcaacaaatggaaggaaagaaagtcagggaagagaaaa
aagacaccagcacagctgtctgcatccatagtcttcctgactgctgaactggacaaaaag
atgaaggaactcgtgtttgcattctgccatcagctgcagtccaagttcctggacatgtct
ctgagtgagcaggttataaagaatttactttttgtggctaaagttgtttacttgctagcc
cctgcctcagaagaaggtaaagaggcaggtggagaactcagctgtgaagtggaagagcag
gaggtctcagaggatgagaaagatacttctgctcaaggagaggaagaaagagaggacacg
caagagaaaggccagccagccacactgctgtggttaatgaagaagctctctgtcatggca
aagagagaagcagcatattcccctaaggtccctttaaagagaagctgcatctttaagttc
ctgggagcaatctcggtggatctggggcaagacaggatcaagccctaccttccaacaatt
ctcacccctctgtacagggagctgaacagcaactatgcagagcaagatccaacactgaag
aacctttcccaagaaatcatagaacttctcaagaagttagtgggactggaggccttttca
ctggccttttcttctgtgcagaaacaggccaaccagaaaagagcaatgaggaaaaagcag
agggctttgcagactgtagcaaatcctgacattgctgcaaggaggaagctgaagagacac
aagaataaagcagaaaccaggaagagaaaaatagaatccctgcgccctatgtacaaggcc
aagcgacatcgcagtcatgcactgaaagatttggcaatggtggaatga
DBGET
integrated database retrieval system
