Corvus cornix (hooded crow): 104696498
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Entry
104696498 CDS
T03546
Symbol
STAB2
Name
(RefSeq) stabilin-2
KO
K19013
stabilin-2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104696498 (STAB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104696498 (STAB2)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Hyaluronan
Cell surface receptors
104696498 (STAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
EGF
EGF_TEN
cEGF
FXa_inhibition
EGF_laminin
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104696498
NCBI-ProteinID:
XP_020440327
LinkDB
All DBs
Position
1A:complement(54251640..54329429)
Genome browser
AA seq
2510 aa
AA seq
DB search
MCGGLEREKVQFTMEKSPGFLFFFAFLVAVKLCLTSQVQDEVKKHCDQKLLIRMKTKCVP
CSLNLDTQCPAGYTKITNGTGTPDCRYYLEIKAYTLSFPGCRHHCVKEFEQPECCQGHWG
PDCMACPGGAASPCNGRGRCSQGITGNGTCTCQKGFGGTACEKCAEDNLFGPDCTSACDC
IHGVCNSGITGDGRCTCLSGYKGLRCDQPIAECEALQCPANSRCAASGEDGRQLQCMCLP
SFHGDSTQCEPINPCSKKVCDPNANCVYLGPNQHKCICREGYRGDGQICLPIDPCQAAHG
SCPAQSSICIYDGPGKSHCECKEHYTNFVPGKGCSMMDICETNNTCHKKAKCLTVAPGQI
ACTCQAGSVGNGFVCYGNIMERLQELNTGGQWQGKLTSSLLLMDNTYEWPLSTLGPFTVL
VPTNKGLKGTNIKDLLKNKQKAQYFVKLHIIAGQLNTSSLNNTNVIYTLTGKSGEMSKGE
KDNQLRIRIQGGRTKGKILQGNIIASNGILHIIDRAMDNVEPTLESSKEKTIMSVLQANG
RYGQFTSLLEKTGLGMDLQQDNQAYTVFVPSNQALSNMKAEVLDYLLSAEGSWKLLELVR
YHIVSNTELEVASLVSIEHIRTMAKQFIHFNRTSTGQVLVSGEKMEETDVVAKNGRIYTL
EGVLIPPTIVPILPHRCDETRSQATKEPKCCKGFFGAECRPCPGGFSKPCSGNGQCMDGL
GGNGTCVCSEAFQGLSCQFCSDPGKYGPQCDKECLCLHGQCDNRVDSDGTCLPGSCRTGY
TGKLCEKQIVPCEPSLQLCHAHADCHLSNGTVSCVCKPGYEGDGLSCSKVDPCAALDPGG
CNINAECIQTGPGELRCVCQAGWTGDGRDCSAINNCLLPTTARCHKNATCIYVGPGQNDC
KCKDGFQGNGIECTPINSCLEQNGKCHHLATCQFESSRGWECVCPKGYEGDGRICYGNAA
DELSTLSEASAFNQWVNEAKINSMLSTTSNLTVLVPSLQAIENMDEDEKAFWMSESNIPT
LLMYHVLTGAYSFADFQNLSSSDMLPTSLQSKFLHLSKENGNLTLEGAHFVASDIASTNG
VIHVIDKVLTPLRSAVMPRLLARLEQMPDYSIFRGYIIQYNLANEIEAANTYTVFAPSND
AVENYLKDKKSATLDEGQIRYHVVLDEKLLKNNLHNGMHRETMLGFSYQVGFFLHNSQLY
VNDAPISYANVATDKGIIHGLGKVLEIQKNRCDINNTVITEKCRICSQPSSCPPGTKEIA
GEKKYCVLTENHMRLYTIQIGCQPKCAKTIITRECCAGFFGQQCQPCPGKAGSACFGNGV
CLDGINGTGTCQCEEGFVGTACESCSEGKYGPNCDQVCTCVHGKCSSGIDGDGSCECDVG
WRGVTCETEIEDDACNASCHTSANCLLLSNGTAYCKCAAGFEGNGTFCTAIDACESSNGG
CSAKAECRRTTPGNRACVCSAGYTGDGIVCIEINPCLVNNGGCDRNAECTQTGPNQAVCN
CLKGYSGDGKTCTYISLCSQNNGGCSEFAICNDTELTERTCTCKPNYIGDGFKCRGNIFQ
ELLRNSNTSRFYFHLEALSMRDIAGPGPFTLFVPRTDILNSDPRVNDWVAKGVMAQVLRY
HMVGCASLLYKDLTAITNITSLHGDLIHISYSQNTLVLNNKAEVILSDAVGTNGVIHVIN
QILVPSHMQDFPLKKESLKMVAAKHGYILFNTLLEKNNLLGLINDPIHKPVTLFWPTDTA
IRGLPQEQQDFLFKKSNTDKLVQYLKFHIVRDAAVLAYQLPSSTSLKTLQGSNLSVSCGD
NGEIGALFLNDGQCKVVQRQLEFDGGIAYGINCLLMEPSLGGRCDSFLTVEFMGHCASCF
SNTKCPPGTKPKEGIHWCTYESYGLRRDGCRRNCSMVIHIAKCCKGYFGPDCQACPGGPE
TPCNGHGSCDDGYTGTGECHCNSGFNGTACELCLPGRYGFTCRPCECKNNGQCDEGYSGT
GRCFCETGWTGRLCETKLALPPTCSPSCSAHAVCTENNTCQCKPLYNGDGITCTAAELCK
QNNGGCHKAAECTQHGVKVFCSCQKGYKGDGFTCLPINPCADGFNGGCHEHAICIVIGPD
RRKCECKSNYVGDGLNCSVMQLPLDRCLQDNGQCHPDADCADLHFQDTTVGVFHLRSPLG
QYKMTYEQAREACANESATIATYNQLLYAQKARYHLCSAGWLDAERVGYPTGFSSPNCGS
GYVGIVDYGRRVNLSETWDVFCYREKEVNCTCKPGYVGDGISCSGNLLQVLMSFPTLTNF
LSDIMAYSNTSRKGREFLQYLTDLSVHATLFAPNDSGLKENETLSGRDIEYHLSNANIMF
YEDLTNGSTLLTRLGKKLLITNSRVQEHQVPTADQGEIRYVDRSAIVEWDIIASNGIIHI
ISEPLKAPSEPAPLHASTGTGIFFGICLVTGIVALIGYSYLRFRKKNTGFQHFKSKDDTD
TTSLDKSQPSNITNPSYESPSTATSPEPTYDLFSDSDDQQLVMSGPHDQN
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggagggcttgaaagagaaaaagtccaattcacaatggaaaaaagtccaggtttt
ttattcttttttgcttttttggttgcagtgaaattatgtttgacatcacaagtccaagat
gaggtgaagaagcactgtgatcagaagctgctcattagaatgaaaaccaaatgtgtacct
tgctctttaaaccttgacacccagtgccctgctggttacaccaaaattaccaatgggact
ggcacaccagactgcaggtattacctggaaattaaagcttacacactttcttttccgggc
tgtcggcatcattgtgtgaaggaatttgaacaacccgagtgctgccagggacactggggc
ccagactgcatggcatgtccaggaggagctgcatcaccatgcaatgggagaggacgctgc
tcacagggcataactgggaatggaacatgcacttgtcagaaagggtttggtgggacagcc
tgtgaaaaatgtgctgaagacaatttatttggtcctgactgcacatcagcttgtgactgc
attcatggagtatgcaacagtggaattacaggggatggaagatgcacttgcttgtctgga
tacaaagggctccgttgcgatcagccgatagccgaatgcgaggcgctgcagtgccctgcg
aactccaggtgtgctgcctcaggggaggatggaagacaacttcaatgcatgtgtctgccc
agcttccacggggacagtacacagtgtgaacctatcaatccgtgctccaaaaaggtctgt
gatcctaatgccaactgtgtttacctggggccaaaccaacacaaatgcatctgtcgggaa
ggttacagaggggatggtcaaatctgcctgcccatagacccttgtcaagcagcacatggg
agctgccctgcacagtccagcatttgcatctatgatggtccaggaaagtcccactgtgaa
tgcaaggagcattataccaactttgtacctgggaaaggctgcagtatgatggacatctgt
gaaacaaacaacacctgccacaaaaaagctaaatgcttaacagttgcaccaggacagatt
gcgtgcacgtgccaggcaggctccgtggggaatgggtttgtgtgctatgggaacatcatg
gaacgcctccaagagctgaacacgggaggacagtggcagggcaagctgacatccagcctc
ttgctcatggacaatacctacgaatggccactgagcactctgggaccatttactgtgctt
gtaccaacaaacaagggactcaaaggtacaaatataaaggatcttctgaaaaataaacag
aaagctcagtacttcgttaaactccatattattgcaggtcaactgaacaccagtagcttg
aataatactaacgtaatatatactttgactggcaagtcaggagagatgtcaaagggagaa
aaggataatcaattaagaattagaatccaaggaggaaggacaaaaggaaaaattttgcag
ggaaatattattgcttccaatggaattttgcacattattgacagagccatggacaatgtg
gagccaacacttgagagcagcaaagagaaaactataatgtcagtacttcaagctaatgga
agatacggccaatttacatctttgttagagaaaactggcctaggaatggatttacagcag
gacaaccaggcttacacagtctttgttccaagtaaccaggctctgagtaatatgaaagct
gaggttctggattatctgctttctgcagagggttcctggaagttgctggagctggtccga
tatcacattgtctccaacactgagctagaggttgccagccttgtctcaatagagcacatc
aggaccatggcaaagcagttcattcactttaacaggaccagcactggacaagtcctggtg
agtggagaaaaaatggaagaaacagatgtggttgcaaaaaatgggcgcatttataccctt
gagggtgttctcatcccacccacaattgttccaatcctaccacatcggtgtgacgagaca
agaagtcaagccacaaaggaaccaaagtgttgcaaaggcttctttggtgctgagtgcaga
ccgtgtccaggaggtttctccaaaccctgctcaggaaacgggcagtgcatggatggcctg
ggtggaaatggcacttgtgtttgctctgaggcatttcaaggcttgagctgccagttctgc
tcagaccctggcaaatacggacctcagtgtgacaaagagtgcctctgccttcatgggcag
tgtgataaccgagtagacagcgatgggacctgtcttcctggatcatgcagaactggatac
acagggaaactctgtgagaagcagattgttccctgcgagccctccctgcagctctgccat
gcacatgcagactgtcatcttagcaatggcacagtgagctgtgtttgcaaacctggctat
gagggagatggcttgagctgcagcaaagttgatccttgtgctgctttagaccctggtggc
tgcaatatcaacgctgagtgcattcagacaggcccgggggagctcagatgtgtttgccag
gcaggatggacaggcgatggaagggactgctcagccatcaacaactgcctgctgcccacc
acggcacggtgccacaagaatgccacctgcatatacgttgggccgggtcagaatgactgt
aagtgtaaggatggatttcaggggaatggaattgaatgcacacccataaactcgtgcctg
gaacaaaatggaaaatgccatcatctggcaacttgtcagtttgagtcttctcgtggctgg
gagtgtgtgtgcccaaagggctacgagggggacggtagaatatgctacggaaatgctgca
gatgagctatccactctgtcagaagcatctgcttttaaccagtgggttaatgaggccaag
ataaactcaatgttgtccacaacctcaaacctaactgtgcttgtgccttctctgcaagca
attgaaaacatggatgaagatgagaaagccttttggatgtcagaaagtaacattccaact
ctccttatgtatcatgtgctgacaggagcttacagctttgctgatttccagaatttatcg
tcctctgacatgctgccaacatcgctacagagcaaattcctacacttgtctaaagaaaat
gggaacctgaccctcgagggcgctcactttgtggccagtgacatcgcatccacaaacggg
gtcattcacgtaattgataaggtgctgaccccgctgcgcagcgctgtcatgccgaggctg
ctggcccgcctggagcaaatgcctgactactccattttcaggggctacattattcaatac
aacctggctaatgaaatagaagcagcaaacacatacacagtctttgccccaagtaatgat
gccgtagaaaattacctaaaggacaagaaatctgctactctggatgagggccaaatccgc
tatcatgttgtgctggatgagaagctcctgaagaacaacctgcacaatggcatgcacagg
gagaccatgctggggttctcctaccaggttgggttcttcctccacaacagccagctatat
gtaaacgatgctcctataagctatgcaaatgttgccacagacaaaggaattattcatggg
ctgggaaaggtcctggaaatccagaagaacagatgtgatatcaataacaccgtgatcact
gagaagtgcagaatttgttcacaaccatcaagttgtcccccaggaacaaaagaaatagca
ggggagaagaagtactgtgtcctcacagaaaaccacatgagactgtacaccatccagatc
gggtgccagcccaagtgtgctaaaaccatcattaccagggagtgctgcgcggggttcttc
ggccagcagtgccagccctgcccgggaaaagccgggagcgcctgcttcgggaacggcgtg
tgcctggatggcatcaacggcacgggcacctgccagtgcgaggaggggtttgtgggcaca
gcctgcgagagctgcagcgagggcaaatacggccccaactgtgaccaagtgtgcacttgt
gtccatgggaaatgcagcagcgggatcgatggggacggctcctgtgaatgtgacgttggc
tggagaggagtgacgtgtgagactgaaatcgaagacgatgcatgtaacgcctcgtgccac
accagtgctaactgccttctcctatcaaatggcactgcctattgcaagtgtgcagctggg
tttgaggggaacgggacattctgcacagctattgatgcctgtgagagcagcaacgggggc
tgttctgccaaggcagagtgcaggagaacaacaccaggaaacagagcctgtgtctgcagt
gccggctacaccggagatgggatcgtctgcattgaaatcaacccttgtctggtgaacaat
ggtggatgtgatagaaatgcagaatgcacacagactggacccaatcaagcagtatgtaat
tgcctgaagggatattctggagatggcaaaacatgcacatatatcagtctgtgttcacaa
aataatggaggctgcagtgaatttgccatttgtaatgacactgagctgacagagaggacc
tgcacttgcaaacctaactacattggggatggatttaagtgccgaggcaacatcttccag
gaacttctcaggaactcaaacacatcgaggttttatttccacttagaggccttgtctatg
agagatatcgcaggccccggccctttcaccctgtttgtccctcgcacagacatcctgaac
agcgacccacgagtcaatgattgggttgccaaaggagtgatggctcaagtgctccggtac
cacatggtgggttgtgccagtctgttgtacaaggacctgacagcaatcaccaacatcacc
tctctccatggtgacctgatacacatcagctactcccagaacacactggttttgaacaac
aaagctgaagttatactcagtgatgctgttggcacaaatggtgtgatccatgtcataaac
caaattctggtcccatcacatatgcaggatttccctctcaagaaggaaagtcttaaaatg
gttgcagccaaacatgggtacattctgttcaacactttgctagagaagaacaacctgctt
ggattgatcaacgatcccattcacaaacccgtcacgctcttctggcctacagacacagcc
atccgtgggctgccacaggagcagcaggacttcctcttcaagaagtccaacactgacaaa
ctggtgcagtacctcaaattccacattgtccgtgacgctgcggtgttggcctaccagctc
cccagctccacctcactgaagaccctgcagggctccaacctcagtgtgagctgtggggat
aacggggagattggcgcgctgttcctgaacgatggacagtgcaaggtggtgcagcggcag
ctggagttcgacgggggcatcgcctacgggatcaactgcctgctgatggagcccagcctg
gggggacgctgcgacagcttcctcaccgtggagttcatggggcattgtgctagctgtttc
agtaacactaaatgccctccagggacaaaaccaaaggaaggaatccactggtgcacctac
gagtcctatgggctgcggagggatggttgccgtaggaactgctccatggtcatccacata
gccaagtgctgcaagggctacttcgggccagactgccaagcttgcccagggggcccagag
accccatgcaacggccacggctcctgtgacgacgggtacacggggacaggagagtgccac
tgcaacagcggcttcaacgggacggcgtgtgagctgtgcttgccaggcagatacggcttc
acctgcaggccttgtgaatgcaagaacaacgggcagtgtgacgaaggatactcagggaca
ggacgatgtttctgtgaaacaggatggactggccggctgtgtgaaaccaagctagctctg
ccgccaacatgctccccgagctgctcggcccacgccgtctgcacggagaacaacacgtgc
cagtgcaagcccttgtacaacggggatgggatcacatgcacagctgcagaactgtgcaaa
cagaacaatggtgggtgccacaaggcggctgaatgcacacagcacggggtgaaagtcttc
tgtagctgccagaagggatacaagggagatgggtttacttgccttccaataaatccttgt
gctgatgggttcaacggaggctgccacgagcatgccatttgcattgtcataggccctgac
agacgtaagtgcgagtgcaaaagcaactacgttggtgatgggctgaactgctccgtgatg
cagctgccccttgaccgctgcctgcaggacaatgggcagtgccaccccgacgctgactgt
gctgatctgcacttccaagacaccacggtcggggtgttccacctgcgctcccccctgggg
cagtacaaaatgacttacgagcaggccagggaggcctgtgccaatgagtcggccaccatc
gccacctacaaccagctgctctacgcacagaaggcgaggtaccacctgtgctctgctggc
tggctggacgctgaaagagtgggctaccccactggcttctcctccccaaactgcggctcc
ggatacgtcggcatcgtggactacgggagaagagtcaatctgagcgaaacctgggatgtt
ttctgctacagggagaaagaggtgaactgcacctgcaagccaggctatgtgggagacggc
atctcctgtagtgggaacttgctgcaagtgctgatgtccttcccaactctgacaaacttc
ctgtcggacatcatggcttactccaacacctctaggaaggggagagagttcctgcagtac
ctcacagacctgtcagtgcacgccactctctttgctcccaatgatagtggattaaaggaa
aatgagacactttctgggagagacatcgagtatcatctatctaatgccaatataatgttt
tatgaggacttgaccaatggaagcacccttctaactcgtctagggaaaaaactcctcatt
acaaactccagggtccaggaacatcaagtccccactgctgatcagggtgagatccgatat
gtggacagaagtgctattgttgagtgggatataattgcttccaacgggataatccacatc
atttcagagcctctaaaggctccatcagaacctgctcctctccatgccagtactgggaca
ggaatattctttggcatctgtctagttactggaattgtggctcttattggatattcttac
ctcaggttcaggaagaaaaacacaggcttccagcacttcaagtcaaaagatgacactgac
accacgtcgctggacaagtcacagccttcaaatatcaccaacccctcatacgaaagtcct
tcgacagcgacttcaccagaacctacttatgatcttttctcagattcagacgaccaacag
cttgtgatgagtggtcctcatgatcagaattaa
DBGET
integrated database retrieval system