Corvus cornix (hooded crow): 104696662
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Entry
104696662 CDS
T03546
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104696662
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104696662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104696662
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
SR proteins
104696662
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104696662
NCBI-ProteinID:
XP_039424602
LinkDB
All DBs
Position
3:12100386..12106030
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AA seq
238 aa
AA seq
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MSRYGRYETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAED
AVLGLDGKIICGSRVRVEVSTGMPRRSRYDRPPARRPFDPNDRCYECGEKGHYAYDCHRY
SRRRRSRSRSRSRSRSRGRRYSRSRSRSRGRRSRSASYRRSRSISPRRYRSFSPRRSRSG
SLRRSRSRSRSRSRSRSVVWPRSRSESHGRSKSGLPAKSRSKSRSPSPKRSHSPSGSP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgatacgggcgatacgagaccaaggtgtacgtggggaatctgggcacgggcgcc
ggcaaaggcgagctggagagagccttcagctactatggaccgctgagaaccgtgtggatc
gccaggaacccgccggggttcgccttcgtggagttcgaagacccccgggatgctgaagat
gctgtgcttggcctcgatgggaagataatatgcggctccagagtcagagtggaagtatcc
acagggatgccgcgccgctcccgctacgaccggccccctgcccggcgccctttcgacccc
aacgacagatgctacgagtgtggtgagaaaggccactatgcctatgactgtcaccgctat
agccggcgaaggaggagcaggtcccggtctagatcccgctcgaggtcccgaggaagaagg
tattcccggtcacgcagtcgcagccgtggtaggagatccaggtcagcttcctaccgcagg
tccaggtcgatctctcctcgtcgatacaggtcattctcaccccgcaggtcccgctctggt
tctctaagaaggtcaagatctaggtccagatcacgctctaggtcccgttctgttgtatgg
cctcgaagcaggtctgagtctcatggtagatctaaatctggcttacctgctaaaagccgc
tcaaagtccagatcaccatctccaaagagaagtcactcaccatcaggaagcccttga
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