Corvus cornix (hooded crow): 104696687
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Entry
104696687 CDS
T03546
Symbol
STAG1
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104696687 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104696687 (STAG1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104696687 (STAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
104696687
NCBI-ProteinID:
XP_010409433
LinkDB
All DBs
Position
9:complement(24812123..24986263)
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AA seq
1262 aa
AA seq
DB search
MITSDLPVLQDSTNETTAHSDAGSELEEAEVKGKRKRGRPGRPPVFFAQSATKKPRKSPA
DKGRADAGARGATRGRANGHPQQNGEGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDI
ALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFR
SNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVN
VALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGI
FVHRYRDAIAEIRAVCIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQ
SLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCEN
VYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLES
ELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQ
AAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIIALPMLLSKYSADAEKVANLLQI
PQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVD
IAHSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFSN
CYRLLRTGIEHGAMPEQIVVQALQCSHYSILWQLVKITEGSPSKEDLLVLRKTVKSFLAV
CQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDSGLQSELLSFVMD
HVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMK
YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKEL
ARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQDYPPPNLAFLEVLSEFSSKLL
RQDKKTVHTYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKASSV
RNKKGRPPLHKKRVEDESLEGSWLNRNENIHTPGTLQTPQLTSTVLRENTRQMGEQIQEH
ESEQGSEQDFLHNPQMQISWLGQQKLEDLNRKDRTGMNYMKGRSGVRHAVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagatttgccagtactacaggattctaccaacgaaactactgcacattca
gatgctggcagtgagcttgaagaagcagaagtcaaaggaaaaagaaaaaggggccgtccc
ggcaggcctccagttttctttgcccagtctgccactaagaaaccccggaagtctccagcg
gacaaggggcgtgccgacgctggagctcgaggagccactcgtgggagagccaatggccac
ccgcagcagaacggagaaggggaccctgtcactttgtttgaggtggttaagctgggaaag
agtgctatgcagtctgtggtggacgactggattgaatcatataaacaagacagggacata
gcacttctggatttaatcaacttctttatccagtgttcaggatgtcgaggtacagtaaga
attgaaatgttcaggaacatgcaaaatgcagaaatcataaggaagatgacagaagaattt
gatgaggacagtggcgattatcccctgaccatgcctgggcctcagtggaagaagttccgc
tccaacttctgcgagttcatcggggtgctgatccggcagtgccagtacagcatcatctac
gacgagtacatgatggacacggtgatctcgctgctcaccggcctctccgactcgcaggtc
cgcgccttccggcacaccagcacactggctgctatgaagcttatgactgctcttgtgaat
gttgccttaaacctgagcattcatcaggacaatacacagaggcagtatgaagctgagaga
aacaaaatgattggcaaaagagctaatgaaagattggagctgctgcttcagaaaagaaaa
gagctacaagagaaccaagatgaaatcgaaaatatgatgaactctatttttaagggtata
tttgttcatagataccgtgatgctattgctgagattagagctgtctgtattgaagaaatt
ggtgtctggatgaaaatgtacagtgatgccttcctgaatgatagttatttaaaatacgtt
ggttggacgctacatgacaggcaaggtgaagtgaggttgaagtgtttgaaagctcttcag
agtctgtataccaacagagagttgtttcccaaactggagctgttcactaatagattcaag
gaccgcattgtgtccatgaccctggacaaggagtacgacgtcgctgtggaagccattcga
ttggtcacgctcattctccatgggagtgaggaggctctgtccaatgaagactgtgagaat
gtttatcacctggtgtactcagcacaccggcctgtggcagtggcagctggggagttcctc
cacaaaaagctgttcagcagacatgatccccaagcagaagaggctctagcaaagaggagg
ggtcgaaatagcccaaatggaaatcttattagaatgttggttcttttctttcttgaaagt
gagttgcatgaacatgcagcctatttggtggacagcttgtgggagagctctcaagaactg
ctgaaagactgggaatgtatgacagaattgctcttggaggagccagtccaaggagaagaa
gcgatgtcggaccggcaggagagcgccctgatcgagctcatggtgtgcaccatccgacag
gctgccgaggcacatccccccgtgggcaggggcaccggcaagagggtcttgacagcaaaa
gaaagaaaaactcagatagacgacagaaataaattgactgagcatttcattattgcactt
cccatgctgctatcaaagtattccgctgacgccgagaaggttgcaaacctcctgcagatc
cctcagtactttgatctggaaatctacagcacaggcaggatggaaaagcatctggatgcc
ttactgaagcagattaagtttgttgtggaaaagcatgtggaatcagatgttctggaagcc
tgcagcaaaacctacagcatcctctgcagtgaggaatacaccatccagaacagagttgac
atagcccacagccagcttattgatgaatttgtggatcgattcaaccattctgtggaggat
ctactgcaggagggagaagaagctgatgatgatgacatatacaacgtgctctccacactg
aagaggctgacctcttttcacaatgctcatgatctcaccaaatgggatctgttcagtaac
tgctacagattgctgagaactggaattgaacacggagctatgccagaacagatcgttgtc
caggcactgcagtgttcccactactctattctctggcagctggtgaaaatcactgagggc
tccccttccaaagaggacttgttggtattgaggaaaactgtgaaatccttcctggctgtc
tgccagcagtgtctatcaaatgtcaacactccagtcaaagaacaggctttcatgctgctc
tgtgatctcctgatgatttttagtcaccagctgatgacgggaggtcgagaagggctccag
cctttggtgttcaatccagactcaggcctccagtcagaactgctcagttttgtgatggac
catgtgttcattgaccaagatgatgaaaatcagagcatggagggagatgaagaagatgaa
gccaacaaaatagaagctttacataagagaagaaaccttctggctgcctttagcaagctg
ataatttatgacattgtggacatgcatgcagcagcagatatcttcaaacactatatgaag
tactacaatgactatggagatatcattaaggaaaccctgagcaaaaccaggcaaattgat
aaaatccagtgtgcaaagacactcattctcagtttgcaacagctgttcaatgagcttgtt
caggagcaaggtcccaacctggacaggacatctgcccatgtcagtggcattaaggagctg
gcccggcggttcgccctcacttttggcttggatcagatcaagacaagagaggccgtggcc
acactacacaaagatggcatagaatttgccttcaaataccagaatcagaaaggacaagac
tatccacctcctaaccttgctttcctcgaagtgcttagtgaattttcttccaagctcctg
cgacaggacaagaagactgtgcacacctacttggagaagttcctgacagagcagatgatg
gagaggagagaggacgtttggctgccgctgatctcgtaccggaactcgctggtgacgggc
ggcgaggacgacaggatgtccgtcaacagcggcagcagcagcagcaaggcctcctccgtc
aggaacaagaagggccgaccccccctccacaaaaagagagtggaagatgagagcctggaa
ggctcctggctgaacaggaatgagaacatccatactccagggacactgcagacacctcag
ctcacctccactgtcctgagagagaacaccagacaaatgggagagcagatccaggagcat
gagtcggagcagggatctgaacaggattttttacacaatccccagatgcagatctcgtgg
ctgggccagcagaagctggaggatctcaatcgaaaggacaggacaggaatgaactacatg
aaaggcagaagtggcgtaaggcacgcagtacgaggtctaatggaagatgacgctgagccc
atctttgaagatgtaatgatgtcctcacgaggccagctagaggacatgaatgaagaattt
gaggacacaatggtcattgatctgccgccgtcgcggaaccggcgcgagcgcgcggagctg
cggccggacttcttcgactcggcggcgatcatcgaggacgactcaggatttggcatgccc
atgttctga
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