Corvus cornix (hooded crow): 104696748
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Entry
104696748 CDS
T03546
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04136
Autophagy - other
ccw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104696748 (ATG4B)
04136 Autophagy - other
104696748 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104696748 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104696748 (ATG4B)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104696748 (ATG4B)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
104696748 (ATG4B)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104696748 (ATG4B)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104696748 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
104696748
NCBI-ProteinID:
XP_039412665
LinkDB
All DBs
Position
9:22984454..23004156
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLRKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNVPCAGAAACPALESDVLYNGCPEDVGLRERLTPWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDSGCLPDESFH
CQHPPCRMNIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactcttacctatgacaccctcaggttcgagtatgaagacttccctgag
accaaagaacccgtttggatcctcggccggaaatacagtgtttttacagagaaggaggag
atcctgttggatgtgacctctcggctttggttcacttacagaaagaacttccctgctatt
ggaggaaccggtcccacgtctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagatggataattacttcaacgttcttaatgccttcattgacaaaaaagacagt
tactactccattcaccagatagcccagatgggagtcggggagggaaaatccataggccag
tggtacggaccaaacacggtcgcgcaggtgctcagaaaacttgcaacttttgacacgtgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatcaggcgg
ttgtgccagtccaacgtgccctgtgctggagctgcagcgtgccctgccctggagtcagac
gtgctctataacgggtgcccagaggacgtggggctcagagagaggctcaccccgtggaaa
ccactggtgctgctgatacctctgcgcctcgggctcacagagatcaatgaagcctatatt
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgatcggagggaagcca
aacagtgctcactacttcattggctatgtaggtgaggagctcatttacctggatccccac
accacacagccggcggtggagcccagtgacagcggctgcctccccgacgagagcttccac
tgccagcaccctccgtgcaggatgaacatcgccgagctcgacccctccattgctgtgggc
tttttctgcaacacagaggcagactttaatgactggtgccagcaaatcaaaaagctgtcc
ctggtcagaggagcgctgcccatgtttgagctggtggaacgccagccctcgcacttctcc
aaccctgatgtcctgaatctcacaccagactcctctgatgccgacagattggaaaggttc
tttgactcggaagatgaagactttgaaatcctgtccctttga
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