KEGG   Corvus cornix (hooded crow): 104696817
Entry
104696817         CDS       T03546                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104696817 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104696817 (NUP54)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104696817 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 104696817
NCBI-ProteinID: XP_019148569
LinkDB
Position
4:complement(1088005..1100174)
AA seq 583 aa
MPFTPVSNYAYLAHGDGKMLQLFFPGPSFHSELMLPCSFSASRSSGFGGLETANSTASGF
NFGGFGLTANPTVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSA
PTNTGTTGLFGATQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQQTTLGSGLF
NQPAQTPAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEF
TQENPFCRFKAVGYSLMPNNKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLT
VNVEGVKTMPDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMA
RTELSPAQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMT
KQHQTRLDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQ
ADEEQLRVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIK
QHLKQQQEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgccttttactcctgtttctaactatgcctatcttgcccacggggatggaaaaatgctt
caacttttctttcctggaccttcctttcactcagaactaatgttgccttgctctttttct
gcttcccgctcgtcaggatttggtgggcttgaaactgcaaactccactgccagtgggttt
aattttgggggtttcggattaactgctaatcccacggtgaattttaatattgggaatttc
ggtgtttccactacctcaactccaccattcaattttggtaacagtctggcaagcgcaggt
gccttcggaggcttcgggacaaccaccaccactgcggcaccagcgttcagcttctccgct
cccaccaataccggcaccactggactctttggtgctacccagaacaaaggctttggattt
ggtaccagttttggcacaggaactggaactggcttgggtagtgggttgggaactgggcta
ggctttggaggcttcggaacccagcagcagcagcagaccacactaggcagcgggctgttc
aaccagcctgcccagacacctgctcagtccaaccagctcatcaatacagccagtgccctc
tcggccccaacactcctgggagatgaaagggatgccattctggccaaatggaaccagctc
caggccttctggggcacgggcaaaggatacttcaacaacaacattgctccggtggagttc
acgcaagaaaaccccttctgcaggtttaaggctgtgggttacagtttaatgcccaacaac
aaggatgaagatggcctcgtggtcttggtgtttaacagaaaagaagcggatattcgaagc
cagcagcagcagctcgtagaatcactacacaaaattttgggaggaaaccagaccctcact
gtcaatgttgaaggtgttaaaacaatgccagatgaccagacagaagtgatcatttacgtt
gtggagcgctcgcccaacggcacctcgaggagagttcctgcaacgaccctctacgcccac
tttgaacaagccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggcc
aggacggagctgtccccagcacaagtcaagcagctcctgcagaaccctcctgccggtgtt
gatcctattatatgggaacaagccaaagttgataatcctgatcctgataagcttattcct
gtgccaatggtgggtttcaaggaactgttgagaagattgaaggtccaggatcagatgacc
aaacagcatcaaactcgattagatataatatctgaagatatcagcgagctgcagaaaaac
caaacgacaactatggcaaaaattgcacagtacaaaaggaaactgatggcactttctcac
agaactttgcaggtgttgataaagcaggagatccaaaggaaaagcggttacgccattcaa
gcagacgaggagcagcttcgtgtacagttggatacaattcagtgtgaacttaatgcaccc
acgcagttcaagggcagactgaatgagctcatgtcccaaatcaggatgcagaaccacttt
ggagcagtgcgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaag
caacacctaaagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgac
ttggaggacatcaaactgatagaacatgggctgaacgagagcattcccatcagaggagga
gtcttcagttga

DBGET integrated database retrieval system