Corvus cornix (hooded crow): 104696884
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Entry
104696884 CDS
T03546
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104696884 (HMBOX1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104696884 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
104696884
NCBI-ProteinID:
XP_010409695
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All DBs
Position
3:complement(113260242..113368932)
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AA seq
455 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYTNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacggacgagcca
agattcaccatagagcagatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
catgagatcctgcacgccctggagaccttggaccgtctcgaccaagagcatagcgacaaa
ttcgggagaaggtctggctacggaggcggctcctacaccaacagcaccaacaacgtcccg
gcgtcttcctcgacggccacggcttccacacagacccagcactccgggatgtccccatcc
ccgagcaacagttacgacacctccccacagccttgcactacgaatcagaacgggagggag
agtaacgagagattgtctgccttcaacgggaagatgtcacccacccgctaccccctggcc
aacagcctggcccagaggtcctacagcttcgaggcttccgaggaggacttggacatcgac
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacaaaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cccgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggaaagttacttcaatgagaatcaataccctgacgaggcaaagagagaagaa
attgccaacgcctgtaatgcagttatacaaaaaccaggaaaaaagttatcggatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccggga
ggtcattccaacagcgacgacgtggatggcaacgactactcggagcaggacacttggcaa
gtacgcaacggggaggaggagggacgatgttccgagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccaccaa
gaccccatttccttagccgtggagatggcagcagtcaaccacaccatcctggcgctggcc
cggcaaggagccaacgagatcaagacagaggctctcgacgacgactga
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