Corvus cornix (hooded crow): 104696930
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Entry
104696930 CDS
T03546
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104696930 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104696930 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccw02044
]
104696930 (SEC31B)
Membrane trafficking [BR:
ccw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104696930 (SEC31B)
Secretion system [BR:
ccw02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
104696930 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
TPR_Sec16
MIOS_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Prp18
Motif
Other DBs
NCBI-GeneID:
104696930
NCBI-ProteinID:
XP_010409797
LinkDB
All DBs
Position
6:complement(18994006..19029362)
Genome browser
AA seq
1215 aa
AA seq
DB search
MKLKEIERTAVQAWSPANNHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMTQK
GTLPASNRFHKLIWGNFGNGALESSGVLIGGGDNGVLTMYSVHRILTSKSDPVIGQTEKH
SGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDVSVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDNRILCWNPSMGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINVYSVMGGNLEAQQRTQADKISSSFNNLDPFGT
GQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQ
DSRIKLLKLLGYSKEDLQKKIASCLSNGIPDKQPRPEADGTNAAPDQLLMNSSDDVAAVS
SSSAFFDNLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIA
GGENLLKETQKRYFAKRKTNLSVLLSCIVQQNWQDIVCTCDLQSWKEALAILLTYSKHED
YTQLCDVLGARLESEGDAALSNDACLCYISSGNVERLVECWVKNHEISSPLALQDLIEKV
MVLSRSIEMLRGTAGPAPGPVLAARITQYANLLASQGCLGAAMNYLPSSSKELLIEQLRD
RLFHAQGDNVGDQQPPPFPYTRVSVGVSKAPAAKSGSTLEGATHKAGPRHPEKPNYQSSF
TPSAPSQPSVPSLFTPQPVPAMSMAPHHVAPPQASTGPQTSVYSRGHPYPQYNVGLNPAT
VSGPAVPQSQPFGPVGVGPVGPAPFSSQPSLPGQPMPIMSPGVPPPRPALFTPASVPSSQ
LSAACPLPVASQSPLDYSSAPFNCPMNMGYPQGGPGAPSTKPLPAAIPPPPTGFFPWLDP
HVDHAAQESWSDSSTGRGGLQKKKLPEKFTPLAPITAPVMGLPAEPQGIHPQLSRLQESG
QSPPGAPKEGSLQYHQLPVESIERKELPPEHQALKATFEGLVQRCSAVATDPKTRRKLED
ALQRLECLYEKLREQALSPTILMGLHEIARCIEAKNYPQGLLVHTQVVSSSSFSEVSGFM
PILKVLMTIAGKLNV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagaaattgagcgaacagctgtgcaggcatggagtccagcaaacaaccac
cctatttacctagcaacaggaacatctgcccaacaactggatgcatccttcagtacaaat
gccaccttggaaatatttgaggttgacttcagggatccctccctggacatgacgcagaaa
ggaacacttcctgcctcaaacagatttcataagctgatctgggggaactttggaaatggg
gctctggagtcttctggagtgctcattggtggaggggataacggagtcctgacaatgtac
agtgtgcaccgcatcttgacttcaaagagcgaccctgtcattgggcagacagagaagcat
tccggtcctgttcgagcccttgacttcaaccctttccagagtaatctcttggcttccgga
gccaatgattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactcca
gggactaaatcccagcctcatgaggacgtcagtgtggtgtcctggaatcggcaggtgcag
catatcctgtcctctgctcaccccagtggcaaggctgtggtttgggacctcaggaagaat
gagcccatcatcaaagttagtgaccacagcaacagaatgcattgctcaggaatggcctgg
catccagaagttgcaacccagctagtcctttcctctgaggatgaccgtttgccagtgatc
caaatatgggacttacgcttcgctacctctcctcttagccagctggaagggcacaccagg
ggagttctctctgtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaa
gacaaccgaatcttgtgctggaacccaagtatgggggaggtggtgtatgagttgcccatt
cggagtcagtggtgctttgatgtccagtggtgtcctaggaatccttcggtcttctctgct
gccactttcgatgggtggatcaacgtttattctgttatgggtgggaacttggaagctcag
cagaggacgcaggctgacaagatctcttcctccttcaacaacctggatccctttggcaca
ggacagagccttcctcctctgcaggtgccagagcaagtaactcagactaccttgattcca
ccattaaaaaagccacccaagtggattcgcagacctgtgggggtttcatttgcctttgga
ggaaaactgattacctttggtcttaccaaagctcctggacagcaaatgcagcagacttac
ccacaccaggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaaa
gaactgcagatggccttgcagtcagggaacctccttgattactgccagggcaagatccag
acagccaagctgccatttgatgagaacctttggaacttcttgaaggtgaatttggagcag
gactccaggattaaacttctcaagctgctgggctacagtaaagaggatctgcaaaaaaag
attgcctcatgtttgagtaacgggatcccagataaacagcctcgtcctgaggcagatggt
acaaatgctgcaccagatcagcttttgatgaattccagcgatgatgtagctgctgtttct
tcctcttcagccttttttgataacctcatcccacagaatatgagcacattggagattcct
gtcacagaagatacagatggactcatcagccaagcccttctgttggggaattttgagggt
gcagtggagctgtgcatgcgagcagagcgctttgctgatgccatcattttagctatagct
ggtggggagaacctcctaaaggaaacccagaagcgctactttgccaagcggaaaacaaat
ctctctgtgctgctttcctgcattgtgcagcagaactggcaagatattgtttgcacgtgt
gatctacagagctggaaggaggcactggccatcttgttaacatactcaaagcatgaagac
tacactcagctctgtgatgtgctgggtgcccgcctggagtcagagggagatgcagccctg
tccaatgacgcctgcctctgctatatctcatcaggaaatgtggagaggttggtggaatgc
tgggtaaaaaaccatgagatttcgtcaccacttgccctacaggatcttatagagaaggta
atggtgctgagcagatccattgagatgctccgaggcacagcaggaccagcaccaggccct
gtcttggcagcacgaatcacccaatatgccaatctcctggcatcacaaggatgcttggga
gctgcaatgaattacctacccagcagctctaaagagctcctgattgaacagctccgagac
cggctctttcatgctcaaggagacaatgtgggtgatcagcagccacccccttttccctac
actcgtgtcagcgtaggggtcagtaaagccccagcagccaagagtggttccacccttgaa
ggagcaacccacaaagcaggtcccagacatccagagaagcccaactatcaatcatcattt
accccttcagcaccatctcagccttcagtgccttccctcttcacacctcagccagtgcca
gcgatgtccatggcacctcaccatgttgcccctccccaagccagcacaggtccacaaaca
agtgtctattccagaggacacccgtacccacagtacaacgtgggcttgaatccagcaact
gtctcagggccagctgtgccacagtctcagccatttggaccagtgggagtcggacctgtt
ggtcctgctcccttctccagccagccgtctctgccaggacagcccatgcccattatgtct
cctggtgttccaccacccagacctgccctcttcactccagcctcagtcccatcatctcag
ctttctgcagcttgtcctctccctgtggcaagccagtctcctctagactactcttcagca
cctttcaactgccccatgaacatgggttatcctcagggcggtcctggagctccatctact
aaacccttgccagcagccattcctcctcctcccacaggtttcttcccttggctagatccc
cacgtggatcatgcagctcaggaatcttggagtgactcctctactggaagaggaggcctt
caaaagaaaaagttgcctgagaaatttactcctctggcccccatcacagctccagtaatg
ggcctgcctgctgaaccccaagggatccatcctcagctatccaggttgcaagaatctggc
cagtcacccccaggagcacccaaggaaggcagcctacagtatcaccagctacctgtggag
agcattgagaggaaggagctgccccctgagcaccaggctttgaaggccacatttgaaggg
ttggtgcaacgctgctcggctgttgccactgatccaaaaacacgaaggaagctggaggac
gcattgcagcggctggagtgtttgtatgagaagctccgtgagcaggcgctctctccaacc
atcctcatgggtctccatgaaattgcccgatgcattgaggctaagaactacccacaaggt
ctcctggttcacacccaagtggtgagcagcagcagtttcagtgaagtgtctggtttcatg
cccatcctgaaagtcctcatgaccattgcaggcaagctgaatgtgtaa
DBGET
integrated database retrieval system
