Corvus cornix (hooded crow): 104696948
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Entry
104696948 CDS
T03546
Symbol
REXO1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104696948 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104696948 (REXO1)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
Pre-60S particles
RNases
104696948 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
104696948
NCBI-ProteinID:
XP_039422102
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Position
28:complement(1258347..1304890)
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AA seq
1232 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGXGAGPGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLSLG
HGAERGYDPYNPELPRPSLEAEDGTLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKELGASEGSSLISNSPVSAAGPQNDSFASLEYNPGSYNFSNNSDYNPTPLAAA
GRSSKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERASDYEESYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASG
SSPSKGGSEGESNNSSESSKEQSTKVDGSASQESKEAAQRREDLPNSQKNLAKNSPDKNP
KAVKLCSGKNNKEIENKNKDSKDKTKRKKTDVSKTPGLSEAGKKEKNKNTDKDKVLKKEE
KLKIKNEEKNCKDKSVKVKADGNLKKPEKQKSEKVDGCKKEKSKSTTSSSGKSKSEGVTK
GTEKVGSSKKDSQSKTADVKNGKESSGRKNKEKGTKSSLEQKKDKVSSAGKGDPKKGRKQ
QSLSHVDLFGDESGDDDDKGRPLSSSLLDVGSDSDGADSGSASESDKDRTKKVKRSKLSK
SSSSSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQLSKEEANEE
KTEDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQL
AVAVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKTTVGGRSVTPSNDSEAPTLPLK
PCTLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDEC
LKFCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKK
VVSHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHP
EKAGRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGNCIRKEECVHHWGRLRKQRVPGG
WETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCY
TKQGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVL
LNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRII
QDNVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggt
nncggggccgggccgggatgccgcaggccctactgccacttccggcaccccccggtggcc
ccggcgccgtgcggagcctccggagcctcgggcgaccccagcgtggggctctcgctcgga
cacggtgcagagcgaggctatgatccctacaacccagagcttcccaggccctcactggag
gcggaggatggcaccctggctgacattacagatgtcacacccggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtac
gaggagctcctggaaaccacgaaggagttgggtgcttcagagggctcctcactcatttca
aactcacctgtgtcggctgctgggcctcagaatgattcctttgcctccttggagtataat
ccagggagctacaacttcagtaataactcagactacaaccccactcctctggctgctgct
ggccggtccagtaaatacactctggattcctcccgctccaaagggagctcactggaatat
gtccccaaggctgtagtgcagaataaaaaatacagcagcactgtcactaacaataaatat
gtgattgatgactccaagccctccacagacttggaatacgaccccctttccaattactct
gccaggctgttgggcaaagccacaaccaaggggtccaaaagggaaagggcctctgattat
gaggagtcttattctccatcaaggaagaagctctgtgaagatcctgatgacgatgaggtg
ttggccaggttctcctcctctgaagatgaggctgaggtggaatataaaacagcttctggt
agttcaccctcaaaaggtggttctgagggtgagtcaaacaactcgagtgagtccagcaaa
gagcagagcaccaaagtggatggctctgcttcccaggagagcaaagaagcagcacagcgc
agggaggaccttccaaattcacagaaaaaccttgccaagaactcaccagacaagaaccca
aaagcagtgaagttgtgttctggtaagaacaacaaggaaattgaaaataaaaacaaagac
tccaaagacaaaacaaaaaggaagaaaacagatgttagtaaaacaccaggcctcagtgag
gctgggaagaaggagaaaaataaaaatacagacaaagacaaagtgctcaagaaagaagaa
aaattaaaaatcaagaatgaagagaaaaactgcaaagacaaaagtgtcaaagtgaaagca
gatgggaacttgaagaaacctgaaaaacagaagtcagaaaaggtggatgggtgtaagaaa
gaaaaatccaagtccaccaccagcagttcagggaaaagcaagagcgaaggtgttaccaag
ggcacagagaaagtggggagcagcaagaaggactcgcagagcaaaacagctgatgtgaaa
aatggcaaggaaagctctggtcgtaaaaacaaagagaaagggaccaagagttccctggag
caaaagaaagacaaggtcagttctgctggaaaaggagacccgaagaagggtcggaagcag
cagagtttgagtcacgtggacctgtttggagatgagagtggagatgacgatgacaaaggc
cggcctttgtcctcctccttacttgatgtgggctcggactcggatggggccgactctggc
tcagcctctgagagtgacaaggacaggacaaagaaagtgaagcgctccaagttgtccaag
tcgtcatcatcttcctcaacatctgatgacattgattattccatccttgagaaagatgtg
gacttcgagtcagatcccatggaagagtgtctgaggatctttaatgaatctaaagatgtg
aaaactgaagacaagggaaggctggggaaacagctgtccaaagaggaagcaaatgaagaa
aagacagaagataatttaactaccttgtttcctggccaaaaaagaaggatctctcatctt
gtcaaacaaggaaatgcagaggccccgagcaagccggtagtgcggccgtaccgtcccccc
acggcccaggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctg
gctgtggccgttcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcac
gtgccaaatgcagccctcaccgcagcagccaagcaaagcctcgggagcagtaagacgact
gttggtggcaggagtgtcacaccttccaatgactctgaagcccccacccttcctctgaag
ccttgcaccttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggta
gcacatgttccttccttacagagcaccactttacagaggcctgttattcccacagaattt
ggtgctaaagtcccaaccaacattcgtcagaggtatctcaatctcttcattgatgagtgc
ctgaaattctgctcctcctcccaggaagccttcgacaaggccctggcagaggagaaggtg
gcctatgagcgcagcaccagccgcaacatctacctgaacgtggctgtgaacaccctgaag
aagctccgcagcctcgtgcccaactccccagccagcaccaacaagacgagtaacaagaag
gtggtgtcccacgaagctgtgctgggtgggaagcttgctgccaagacaagctttactctg
aaccgctcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctc
aaggagtacctgatgaccgaggagcagctcaaggagaacgggtacccaatgcctcacccc
gagaaggctggacgtgctgtgctcttcactgcagaggagaagaaagtgattgactcctcc
tgcaggatctgctgtcgctgtggcaccgagtacatggtctcagcctcggggaactgcatc
cggaaggaggagtgcgtccatcactgggggcggctgcgcaagcagagagtgccaggtggg
tgggaaactcactacagctgctgctccggagctgtggggtcaccaggctgccaggttgct
aaacaacacgtgcacgacgggcgcaaggagagcctggatggctttgtgaagacttttgag
aagctgcccacgactgatggctaccctgggatctacgccttagactgtgaaatgtgctac
actaagcaaggactggagctgacaagagtaactgtgatcaactcggagctgaaagtggtc
tacgacacctttgtcaagccagactccaaggtggtggattacaacaccagattctcaggt
gtgacagaagaggacctggagaacacgagcatcaccctgcgggatgtccaagccgtccta
ctgaacatgttcagtgcagacaccatattgatagggcacagcttggaaagcgacttattt
gcactaaagctgatccacggcaccgtggtggacacagccatcgtgttcccccaccgcctg
gggctgccctacaagcgggccctgcgcacgctgatggccgactacctcaaacgcatcatc
caggacaatgtggaaggacacgactccagcgaggacgccagagcctgcatggagctgatg
gtgtggaagatcaaagaggatgcgaaagtgaagcgatga
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