Corvus cornix (hooded crow): 104696991
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Entry
104696991 CDS
T03546
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104696991 (PAX2)
04131 Membrane trafficking [BR:
ccw04131
]
104696991 (PAX2)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104696991 (PAX2)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104696991 (PAX2)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
104696991 (PAX2)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104696991 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
104696991
NCBI-ProteinID:
XP_039410243
LinkDB
All DBs
Position
6:19290194..19393716
Genome browser
AA seq
479 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASND
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEA
LDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQ
TYPVVTENLSSPLSIKQEPHGASLTPFTPTTPVGSGQADLQPFHMALSDDASTPCYSAFL
HHGAHFGQSSSQPLIAGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYS
HPQYTTYNEAWRFSNPALLMPHPGAPHLPLLPLPMTATSYHGNHMKLQGDSLGLHIVPV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaagcagaccccttctcagcaatgcacccagggcacgggggtgtg
aaccagctcgggggggtgtttgtgaacggcaggcccctacctgacgtggtgagacaaagg
atagtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgggtc
agccacggttgtgtcagcaagatcctgggcaggtattacgagacgggaagcatcaagccc
ggcgtgatcggaggctccaaacccaaagtggccacccccaaagtagtggataaaatcgcc
gagtacaagagacaaaacccgacaatgttcgcctgggagatccgggacaggctattggcc
gagggcatctgcgacaacgacacggtccccagcgtctcctccataaacaggatcatcaga
accaaagttcagcaaccttttcacccaacaccagatgggagtgggacaggtgtgactgca
ccaggacatactattgtgcccagcacagcatcccctcctgtctccagtgcctccaatgat
ccagtgggctcttactccattaacgggatcctggggattcctcggtcgaatggcgagaag
aggaaacgtgatgaagatgtatccgagggctcagttcccaatggagattcccagagcagc
gtggacagtttgcggaagcaccttcgtggcgacactttcacccagcagcagctggaagct
ttagatcgagtttttgagcgtccttcttaccctgacgtctttcaaacatcagagcacatc
aaatctgagcagggtaatgagtactccctcccagctctgacccctggtctcgatgaagtc
aaatcaagtctatccacctctgctaacccagacctggggacaaatgtgtcaggaccccag
acgtaccctgtggtgaccgaaaacctctcctctcccctcagtataaagcaagagcctcat
ggagcctctctcacccctttcacccccaccacgccggtcggctctgggcaggctgatctt
cagcccttccacatggccctttcagacgatgcgtccacgccttgctacagtgccttcctt
catcatggtgcccactttgggcagtccagcagccagcctctgatagcaggtcgtgatatg
gcaagcaccaccttgcctggctacccaccccatgttcccccaacaggacaaggcagctac
ccaacatcaactcttgcaggaatggttcctgggagcgagttttcagggaacccctacagc
caccctcagtacacgacctacaacgaggcctggcggttcagcaaccctgcattactaatg
ccacatcccggggctccgcacctcccactgctgccgctgcctatgaccgccactagttac
catggaaaccacatgaaactgcagggcgacagcttaggcctccacattgtacctgtctga
DBGET
integrated database retrieval system
