Corvus cornix (hooded crow): 104697008
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Entry
104697008 CDS
T03546
Symbol
BSG
Name
(RefSeq) basigin isoform X1
KO
K06535
basigin
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104697008 (BSG)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104697008 (BSG)
04515 Cell adhesion molecules [BR:
ccw04515
]
104697008 (BSG)
04090 CD molecules [BR:
ccw04090
]
104697008 (BSG)
Exosome [BR:
ccw04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
104697008 (BSG)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
Other
104697008 (BSG)
CD molecules [BR:
ccw04090
]
Proteins
104697008 (BSG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Ig_4
Ig_PDGFR_d4
Sp38
Ig_CD22
C2-set
Motif
Other DBs
NCBI-GeneID:
104697008
NCBI-ProteinID:
XP_039422145
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All DBs
Position
28:2867532..2879356
Genome browser
AA seq
386 aa
AA seq
DB search
MAAGAAGTRAVLALLVLCSMAAGAVGTTGFIKSPLSQKRLTQDSVELYCEAIGNPIPEIQ
WWFEGNDPNETYAQLWDGARQDRVKINATYNLHSTSTISIANLTSDDSGMYECRASNDPD
RNHLSKSPKVKWIRSQANVFVIERPEIATQVSESSGKLTLSCNVSTPQLAIMGHKWMHEE
KVLLQDEGTSAFTSYTINGKREEHSGIYECVYEANPQIRGQVNISVAPQVVAYKKSEHGN
EGDTGVLVCKNPSFPAVTTWSWHKSGHGLLENASGRYIIKSSGNKTELRILKLDIEQDTG
DYFCNGTNSFGTGDATVNLRVRSRLAALWPFLGIVAEVLVLVTIIFIYEKRRKPDEVPDD
DDGGSAPLKSNATNHKDKNVRQRNAN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcggcgggaacgcgcgcggtcctggcgctgctcgtcttgtgctcgatg
gccgccggcgccgtggggacaactggttttataaagtcaccgctgtctcaaaagagactg
actcaggacagcgtggagttgtactgcgaggcgattggcaatcccatccctgagatccag
tggtggtttgagggcaacgaccccaatgagacctatgctcagctctgggatggcgcacgg
caggaccgtgtcaaaatcaacgccacctacaacctgcactctaccagcaccatctccatc
gcaaacctcacgagcgacgactcgggcatgtatgagtgccgggctagcaacgaccccgac
cgcaaccacttgtcgaagagccccaaagtcaagtggatccgttcccaggcgaacgttttt
gtcatcgaacgtccagaaattgctactcaagtctctgagagttctggcaagctgaccctc
agctgtaatgtgtctacaccacagctcgccatcatgggccacaagtggatgcacgaggag
aaggtcctgctgcaggatgagggcacgagtgctttcaccagctacacaatcaatgggaag
agggaggagcactccggcatctacgagtgtgtctatgaagcaaacccgcagataagagga
caagtgaatatttcggttgcccctcaggtggtggcctacaagaagtccgagcatgggaat
gagggggacacaggtgtgctggtctgcaagaatccctctttccctgctgtcaccacttgg
tcctggcacaaaagtggccacgggctcctcgagaacgcctctgggcgatacatcatcaaa
tccagtggcaacaagacagagctacgcatccttaaactggatattgagcaggacacaggc
gactatttctgcaatggcaccaactcgtttggcaccggggatgccacggtgaacctgcgc
gtccgcagccgcctggcagcgctctggcccttcctgggcattgtggcagaagtcctcgtt
cttgtcaccatcatcttcatctatgagaagaggaggaagccagatgaggttcctgatgat
gatgatggaggctctgcaccactgaagagcaatgccacaaaccacaaggacaagaacgtc
cgccagagaaacgcgaactaa
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