Corvus cornix (hooded crow): 104697026
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Entry
104697026 CDS
T03546
Symbol
PSD
Name
(RefSeq) LOW QUALITY PROTEIN: PH and SEC7 domain-containing protein 1
KO
K12494
PH and SEC7 domain-containing protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104697026 (PSD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104697026 (PSD)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104697026 (PSD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
104697026
NCBI-ProteinID:
XP_039410116
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All DBs
Position
6:19518149..19563853
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AA seq
1100 aa
AA seq
DB search
MAQAGAPVRFHAEDGCAASPPPFAHRVNRRPWLVGDSPEAGRCSPPPCLTPNLNAGRLHL
LRKGLAPDARRCPLGLYNSTGSLARRPAEAAPLGSGSCPGAGRLTAPCTPRRGRPSPAVA
SLGSRSPPVAATPEGHSSVVTFRFIEKASVRTVGCPTTPHLRWENGPYSLSRSLELXGDV
GSPQPQPLPQERLLHTLKLEASASDPLLAGGRTPGETRPCGKELCALDTSCLCRSLTNGL
PEEFPTFARSPLKPEPRHQGSTWLYPRQSSAHAQRIAKAKWEFFYGSSDTPKTGSSAPDS
APLAELPQKPVSPLPTEPPGLLPEHNLSHVEVEIEVSPLGSQKPGSCETGIIRRTVKYSE
TDLDTVPLRCYRETNIDDILAEKEEVDSAIESQKDSESNPSFVGTPGRRISTPEEPPAPA
TSCSKDGLRDRDVEEDDEVFEAMRKEKRIMDQDTQGMLKSPVPFLLGHSLSKDGMDSFSK
HFETIMESHRAKGTSYTSLDSIDILSSPAHTHGTFFTFDLPTLTPEIQGQIRDSAKLIEE
NFAPLAHLEPDSGTSSATDAPWTEREEERGRRRKGVRHSPCHSEDSFGTPLASNTSDRPQ
SQLVSDSESEMDSVEQLALGSTDTLSNGHKADLEAAKRLAKRLYNLDGFKKADVARHLGK
NNEFSRMVAGEYLKFFVFTGMSLDQALRSFLKELALMGETQERERVLAHFSQRYYECNPN
SISSEDGAHTLTCALMLLNTDLHGHNIGKRMSCSDFIGNLEGLNGGTDFPKELLKALYGS
IKNEKLQWAIDEEELRKSLSELADPNPKSIKRISSCSNPFLDFSQDSSIATYKHGLLVRK
IHADPDCKKTPRGKRGWKPFHAILKGMILYLQKEEYKPGKALAEEELKNAISIHHSLATR
ASDYSKRPNVFYLRTADWRVFLFQAQNPEQMHSWITRINVVAAMFSAPPFPAAIGSQKKF
SRPLLPSSCTRLSQEEQVKNHETKFKTMSAELLEHRSSLPEKKVKGKEYEELKQREEYLE
FEKSRYGTYAMLLRAKLKAGSEDLAAFESTLLDTAGGEDDGLKKSRSSPSLNAEPSSTTK
VKRNISERAGRQPPGHPQKS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcaggggcacccgtccgcttccacgccgaagacggctgcgctgcctctccc
ccgccctttgcccacagggtgaaccggaggccctggctggtgggggacagccccgaggct
gggcggtgcagccccccgccctgcctcacccccaacctcaacgccggccgcctccacctg
ctgcgcaagggcctggcgcccgatgctcgccgctgccccctcggcctctacaacagcacc
ggctccttggcccgcaggccggccgaggcagcgcccctcggcagcgggagctgcccaggc
gcggggcgactgaccgccccctgcaccccacggcggggccggcccagcccggctgtcgcc
tctctgggcagccgcagtccaccggtggcggcgaccccggagggacacagctccgtggtc
accttccgcttcattgagaaggccagcgtgcgcaccgtgggttgcccgacaaccccccat
ctccgctgggagaatggcccctacagcctcagccgcagtctggagctcnggggggatgtg
ggatccccccagccccagcccctgcctcaggagcggctcctgcacacgctgaagctggag
gcctctgcatctgacccactcctggccgggggcaggacccctggggagacacgtccctgt
gggaaggagctctgtgccctcgacaccagctgcctctgccgatccctaaccaatgggctg
ccagaggagttccccaccttcgccaggagtcccctgaagccagagccccgacatcagggc
agcacctggctgtacccccgacagagctccgcccatgcccagcgtattgccaaggccaag
tgggaattcttctatggctcctcagataccccaaagacaggctcctctgcccccgactcc
gctcccctggctgagctcccccagaagcctgtctccccactgccaactgagccaccaggg
ttgctacctgaacacaacctgagccatgtggaggtggagatagaagtgtctcctttgggc
agccagaagcctggctcctgtgaaactgggattataaggaggacagtgaagtactctgag
acagacctagacactgtgccactgaggtgctatcgtgaaaccaacatcgatgatatcctg
gctgagaaggaggaggttgattcagcaattgagagccagaaggacagtgagagcaaccca
agttttgtgggcacgccaggcaggaggatcagcacaccggaggagccacccgccccagcc
accagctgctcaaaggatgggctgcgggacagggatgtggaagaggacgatgaggtgttt
gaggcgatgaggaaggaaaagaggatcatggaccaagacacacagggtatgctcaagtct
ccagtgcccttcctcctagggcacagtctctccaaggatggcatggactctttcagcaag
cattttgagactatcatggagtcccatcgagccaaaggcacatcttacaccagcctggac
tccattgacatcctttcttccccagcccatacccatgggacctttttcacttttgacctc
ccaactctcaccccagaaatacagggacaaatccgagatagcgccaagctgatcgaggag
aactttgctcctctggctcacttagagccggactctgggaccagttcggccacagatgcc
ccctggacagagagggaagaggagcgggggagacgaaggaagggcgttcggcacagccct
tgccactcagaggacagctttggcactcccttggcctccaacacaagcgaccgcccccag
agccagctggtttcagactcggagtcggagatggacagtgtggagcagctggccctgggc
agcacggacacgctttccaatggacacaaggctgacctggaggctgccaaacgcctggcc
aagaggctctacaatctggatggctttaaaaaagcagatgtggctcgccacttggggaag
aacaacgagttcagcaggatggtggcaggggaatatctgaagttctttgtgttcacaggg
atgagtctggatcaggctctcaggtcctttctaaaagagctggccttgatgggagagaca
caagagcgagagcgggtgctggctcatttttcccagcgctactatgagtgtaatcctaat
tccatctcttcagaagacggagcccacaccctcacgtgcgccctgatgctgctaaacaca
gatctgcacggacataacattgggaagagaatgtcctgctccgacttcattggcaacttg
gagggactcaatggaggcactgacttccccaaggagctgctcaaggctctgtatggctcc
atcaagaacgagaagctgcagtgggccatagatgaggaggagctgagaaagtccctctca
gagctggcagatcccaacccgaagtccatcaagcgcatcagcagctgcagtaaccccttt
ctggacttttcccaggactccagcattgccacttacaagcatgggctgttagtccgcaag
atccacgctgatcctgactgcaagaaaacaccccgagggaagcgcggctggaagcccttc
cacgccatcctgaaggggatgattctctacctgcagaaggaggagtataagccagggaag
gcgctggcagaagaagaactgaagaatgctattagcatccaccattcacttgccacgcgg
gcatctgactacagcaagcgacccaatgtcttctacctcaggacagctgactggagggtc
ttccttttccaagcacagaaccctgaacagatgcactcgtggatcacacgcatcaacgtg
gtggcagccatgttctctgcaccccccttccccgcagccatcggctcccagaagaagttc
agccgcccgctgctgcctagctcctgcaccaggctgtctcaggaggaacaggtgaagaac
catgagaccaagttcaagacaatgtcagcagagctactggagcatcgttcctcactgcct
gagaagaaggtgaaaggcaaggagtacgaggagctaaagcagagggaagagtacctggaa
tttgagaaatcccgctatggcacctatgccatgctgctgcgggccaagctgaaggctggc
tctgaggacctggcagcatttgagtccaccctcttggacacagcgggtggggaggacgat
ggcctgaaaaagtcccgctccagcccctcgctcaacgcagagccctccagcacaaccaag
gtgaagcgcaacatctcagagcgcgctggccgccagccccccggccacccccagaagtcg
taa
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