Corvus cornix (hooded crow): 104697046
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Entry
104697046 CDS
T03546
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104697046 (POLRMT)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104697046 (POLRMT)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
104697046 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
104697046
NCBI-ProteinID:
XP_039422265
LinkDB
All DBs
Position
28:complement(2893318..2907244)
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AA seq
1224 aa
AA seq
DB search
MSLLRLRAVLRGPGGLRGPVIPWRITRSYSSASTKEKANRNGTCERTELLEVLKARAKQL
QGSSVPEVVVNKVELAPLDNDKYQEAVAPSRKEKPPIPRARDDGLAQSSTWAKKLQKEMY
IRQLKVEQKLPSAASQLALEGQVKLEVEAEARAKAKIMNSPKIPMTKAAAAWSQSSGGPH
SKPRVVEAKEGAQLKRPQRMPRDNSNQQVLQQTIQSNLECFLFLQQPEQAEQYLLLCHSS
PVKRKVLDVGAYNTVMRIWARKGCLNRIDRLFSMLEPAGLRPNLDSYAVALECMGRNQSP
PKAIWRYLQHLNSNGFHVDELFQKCLFEADEKEMVLWAVRTVQPSYQLPPPPSPQICKSS
LLQDFYSRETMVSYPKLDFSVKELQECFQQQLEMELKNTITIESVEAAKPLTPQAVKARE
LLATLRSQWHNAILQALQNSKRSMARPKKLSKYSVLYPYLCLLPDEEYVDIMLQVLNDLS
PQGESLAILARELGSKVYDRYIIQRKLRSCQLEKVQEIYEKYIQLLAKDSQPKQYLPREY
WEKLVAEAGFGPSLNLKNCSWPCVLLMRLGMHMLELLVKSVKVPRNILNRRLESRPIPVL
YHVYSFYSNWQVGLVKPHPIFSQLVANAAETTLTFNSSAMPMLCPPLPWTSPRFGAFVLN
DTKLMRFMDETIHHQLLLEQCPLVNLHPVLDALNQLGNCAWKINQPVLDIIISIFNDKGD
EKLDIPPPLSEAPKPPTAPGHSSTWSKSLKHELFLCKKKTAEMHSLRMDALYKLSIANYV
RDKVFWFPHNMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRPLGPRGLDWLKIHLINLT
GLKKKNALQERLEYANEIMEDILDSADHPLTGRKWWMDTDEPWQTLACCMEIAKASRSPD
PAAYISHFPVHQDGSCNGLQHYAALGRDLSGAASVNLVPCGLPQDVYSAVAQQVEEFRKK
DAERGLKIAQVLQGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIEEFPEEYLWEAS
HYLVKQVFNSIKEMFSATRNIQNWLTESAKLIAQSGRTVEWVTPLGLPIIQPYYRSRSTV
LNCGMQRLSVKNSNSSQKPDTVKQKNAFPPNFIHSLDSTHMMLTALHCLRKGLTFVSVHD
CYWTHALTVDVMNQVCRQQFVALHSEKILQDLSEFMLEKYCSSSSSSTEPIAHWQKRLME
QLSNVPRTGEFNLKQVMDSTYFFS
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgcggctgcgggcggtgctgaggggcccgggcgggctgagggggcccgtg
atcccgtggagaatcaccaggagctactcctctgccagtaccaaggagaaggcaaacaga
aatggcacctgtgagaggacagagctgctggaagtgctcaaagctcgagcaaagcagctc
caaggcagtagcgtcccggaggtggtggtcaacaaagtggaactggccccactggacaat
gacaagtaccaggaggctgtggctcctagccgcaaggagaagccccccattcccagggca
cgggatgatggcctggcccagtccagcacctgggccaaaaagttgcagaaggagatgtac
atccgacagctgaaggtggagcaaaaattgcccagtgctgcctcccagctggctctggag
ggccaggtcaagctagaggttgaggcagaggccagagccaaagcaaaaatcatgaacagc
ccaaagatcccaatgacgaaagcagccgctgcctggagccagagctctggtggcccccac
agcaagcccagggtagtggaagcgaaggaaggtgcgcagctgaagaggcctcagaggatg
ccaagggacaacagtaaccaacaggtcctgcagcagaccatccagtccaacctggagtgc
ttcctgttcctgcagcagccggagcaggccgagcagtacctcctgctgtgccacagctct
cccgtgaagaggaaggtgctggacgttggtgcctacaacactgtgatgcgcatctgggcc
aggaagggctgcttgaatcgcattgaccgattgttttccatgctggagcccgccggcctc
cggcccaacttggactcttacgcggtggccctggagtgcatgggccggaaccagtcgcct
cccaaagccatctggagatacctgcagcatctgaacagcaatggcttccacgtggatgag
ctcttccaaaagtgcctgtttgaggcagatgagaaggagatggtgctgtgggccgttagg
actgtgcagcccagctaccagctgcctcctccacccagcccccagatctgcaagtcttct
ctgctccaggacttctattccagagagacgatggtgtcgtaccccaagctggatttctct
gtgaaggagttgcaggagtgcttccagcagcagctggagatggagctgaagaacaccata
accattgagtcagtggaggcagccaagcccctgaccccgcaggctgtcaaagcgcgtgag
ctgctggctaccctccgctcccagtggcacaatgccatcctccaggccctgcagaattcc
aagcgcagcatggccaggcccaagaagctgtccaagtacagcgtcctctacccctacctg
tgcctgctgccagatgaggagtatgtggacatcatgctgcaggtcctcaatgatctgtct
ccacaaggtgagtccctggcaatcctggccagagaactgggctccaaggtctatgacagg
tacatcatccagaggaagctgcgcagctgccagctggagaaggtgcaggagatctatgag
aagtacatccagctgctggcaaaggacagccagcctaaacagtacttgccacgggaatac
tgggagaagctggtggcagaagcaggctttgggccctcccttaacttgaagaactgcagc
tggccctgcgtgctcctcatgcgcctgggcatgcacatgctggagctcctggtgaagtca
gtcaaggtgcccaggaacatcctcaatcgtcgcctggagtccaggcctattcctgtcctc
taccacgtctactccttctacagcaactggcaggtcgggctggtaaagccccatcccatc
ttctcccagcttgtggcgaacgctgcagagaccacgctgaccttcaactcctctgccatg
cccatgctgtgccccccgctgccctggacctccccccgttttggcgcctttgtcctcaac
gacaccaagctgatgcgcttcatggatgagaccatccaccaccagctgctcctggagcag
tgtcccctcgtgaacctccaccccgtgctggatgccctgaaccaactgggcaactgcgcc
tggaagatcaaccagccggtgctggatattatcatttccatcttcaacgacaaaggggat
gagaagctggacattccacctcccctctctgaggctcccaagcctcccactgctcccggc
cattcctcaacctggagcaagtccctcaagcacgagctgttcctgtgcaagaagaagact
gcagagatgcacagcctgcggatggatgcgctctacaagctctccatcgccaactatgtc
agggacaaggtgttttggttccctcacaacatggacttccgtggcaggacttacccatgc
ccgccctatttcaaccacctggggaacgatgtcacccgggccatcctgctgttcgcagag
ggaaggccactggggcccaggggacttgactggctgaagatccacctcatcaacctgacg
gggctgaagaagaagaacgccttgcaggagcggctggagtatgccaatgaaatcatggag
gacatcctggactcagctgaccacccactcacgggcaggaagtggtggatggacaccgat
gagccctggcaaaccttggcatgctgtatggaaatcgccaaagcctcgaggtccccagat
ccagcagcctacatctctcacttcccggttcaccaggatggctcctgcaatgggctgcag
cactatgcagcgcttggccgggacctcagcggcgctgcctccgtcaacctggtaccctgt
gggctccctcaggatgtctacagtgcagtggcccagcaggtggaggagtttcggaagaag
gatgctgagcgggggctgaagatcgcccaggtgctgcagggcttcatcagccgcaaggtg
gtgaagcagacggtgatgacggtggtgtatggggtcactcgctacggcggccgcctgcag
atagagaaacgcctcaaggagatcgaggagttccccgaggagtacttatgggaagcatct
cattacctggtgaagcaggtgttcaacagcatcaaggagatgttctcagcaactcgaaat
atccagaactggctgacagagagcgccaagctcatcgcccagtcgggccggacggtggag
tgggtcacaccgctggggctccccatcatacagccctactatcgctccaggtccactgtg
ctgaattgtggcatgcagcgcttgagtgtgaaaaactccaacagcagccagaaacctgac
actgtgaagcagaagaacgcctttccccccaacttcatccactctctggactccacacac
atgatgctcacagcactgcactgcctcaggaagggcctgaccttcgtctcagtccacgat
tgctactggactcacgcgctcaccgtggatgtcatgaaccaggtctgtcggcagcagttc
gtggctctgcacagcgagaagattctgcaggatctgtctgagttcatgctggagaagtac
tgcagttcatccagctccagcacagagcccatagcccattggcagaagagactgatggag
cagctgtcaaatgtccccaggacaggtgaattcaacctgaaacaggttatggattccacc
tatttcttcagctga
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