KEGG   Corvus cornix (hooded crow): 104697108
Entry
104697108         CDS       T03546                                 
Symbol
TET2
Name
(RefSeq) methylcytosine dioxygenase TET2 isoform X1
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104697108 (TET2)
   03036 Chromosome and associated proteins [BR:ccw03036]
    104697108 (TET2)
Enzymes [BR:ccw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     104697108 (TET2)
Transcription factors [BR:ccw03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    104697108 (TET2)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104697108 (TET2)
SSDB
Motif
Pfam: Tet_JBP
Other DBs
NCBI-GeneID: 104697108
NCBI-ProteinID: XP_039406468
LinkDB
Position
4:complement(30812738..30884427)
AA seq 1986 aa
MSARLRDTAEIRSEGSLVDGPGAGQMEQDRTNHVDGNRLSPFLIPQSSHVCQAEPSAVKL
QNGSPATERPDVEVNGDRKPLFNKSNFGVPHPKGSPNNCVSPDLLQEKKVYSKYMQNGGI
KRTYSEPTLYGLHDSKKVKQDKEVNGEKAEPEDNSEKPSVSNCYSEKKPENFTRQEKDAS
DLIPSTRYNSVGSENPHDLLIQDEQERENIHCHNRDIVLLLKNKAVPMPNGATVSASSME
SMHGELLEKTLSQYYPEHVSIAMQKNTSHINAITSQATNELSYETTHSSHTSGQITSSQT
SNSELPQVPAVVVTEVYNTEDSSKPPVLPGSCSLQKPELQLQQQIAGYDPHRLPVGNSKI
HGSIGQVPNQDLSLSSSSNLQAQSTALERYSEQAENNGAFFTQNSTFHKDSSTPPAPEMN
SALSAVVQEGHHSYDNRCDETLPGEIKNEGQQEGPMSESPSLSQQQLHPQQSLLRQAQTS
QQDVSESNPQAAVAASILQRPEEVTLASEPPLQNLHAHRSEGELQQHYQHFPGQREPETP
PDKEKDQVKEPVQQAQQYSKPAWIELVSTHFRQGEPPQKPSEALLRSILQYQASTAQTVY
TKQYAGSPDSLKGPSGQAQSQKIMQKEQLPPLYKSESSQLQPHPPADQQLPFHKHSPQPQ
LTKVDSLLKSQVQQQPPQQLHFQPRSEQQAEQHLGAPLKQQHLNPQPGEKGQFLHSHILQ
QMLQKQAHPVQLPRSPQLTPNQQQAPQMRTKDLPQAISHPQSNAEQSLDRKSFNQLKADE
CFQTGNKYGKSAAFPLPNHQLGLEQVQTVNNKAPLYTQQANVSVQHPCPNNRHMISEKKG
NAANMECFGANKMQDLQHMQYFSNNLTAKQDVNHCFQEREQQTQQASVLQLPPLQPSQGY
GASLNQDLPSKQAPQIPQQYLPHSQTAPHAQDQRGCHLQSQTSKDFQKHAALRWHLLQKQ
EQQAYQQPKTETGPSAARKPIKIEAGTKSNVCMRPSAGQLENKMWKKTIKQENQHFGCEN
TQQKSIIETMEQQLKQIQVKSLFDHKTFTLKSPKHVKVETAGPITILSRNTSAADFDTQT
PILDQQANLSAEKTPTKRTAGTVLNNFLDSPSKLLDTPVKNLLDTPAKTQYDFPSCSCVE
QIIEKDEGPFYTHLGAGPNVAAIREIMEERFGQKGKAIRIERVVYTGKEGKSSQGCPIAK
WVVRRSSQEEKLLCLVRERAGHTCETAVIVILILVWEGIPTSLADKLYSELTDTLRKYGT
LTNRRCALNEERTCACQGLDPETCGASFSFGCSWSMYYNGCKFARSKIPRKFKLMGDDPK
EEEKLESNLQNLSTLMAPTYKKLAPDAYNNQIEYEHRAPECRLGLKEGRPFSGVTACLDF
CAHAHRDLHNMQNGSTLVCTLTREDNREIGQTPEDEQLHVLPLYKVSDVDEFGSTEGQEE
KKRNGSIQVLTSFRRKVRMLAEPVKTCRQRKLEAKKAAAEKLASLENGSSKEREKSAAAR
NKQGTSEAAGHAKQLADLLRLSGPATQQQQQQQHPQRTLPNNPQSNPINSYSGSGSANLY
GRLPNPANAYPNSSYTSDPYGGSNPMNLYTTSSQSVGSYLNSSSPMNPYSGSLSQNNQYP
PYQCNGNIAMDNCPSYLGSYPSQHQHTDLYSCQSQDHMSKLGLPPIQTLYQHRFGNNQSF
GPKYLNYGNQNMPIDSFSNCTIRPNLHHLGPFSSYSTHDANGHFMEVASRLKSNLSNPSM
DYASMSKTSEHHHMQPPPHLPHDYHSAPNMFSGLPNSLHLQNKDNEMISHAVNGLSNMLP
GQNHDRTTPQGGLDKTDVLNPEKAEDPDEVWSDSEQNFLDPEIGGVAVAPSHGSILIECA
KRELHATTPLKNPNRNHPTRISLVFYQHKSMNEPKHGLALWEAKMAEKAREKEEECEKYG
PDYVPQKSYGKKAKREPAEPHEPSEPTYVRFIKSLAQRTLSVTTDSTVTTSPYAFTRVTG
PYNRYI
NT seq 5961 nt   +upstreamnt  +downstreamnt
atgtcggcgaggctgagggacacggcagagatacgttcagagggtagccttgtggatggc
cccggagcaggccagatggaacaggacagaaccaaccatgttgacggcaatagattgagt
ccatttctaataccacagtcttctcacgtttgccaggcagagccttctgcagtgaagcta
cagaatgggagtccagcaacagagaggcctgacgtggaagtaaatggagaccgcaagccg
ctattcaataaaagcaactttggagtgccccacccgaagggaagtccaaacaattgcgtt
agccccgaccttttacaagaaaagaaagtctattcgaaatatatgcaaaatggtgggatc
aagcgcacttatagcgagcccactctgtatggacttcatgacagcaagaaagtgaaacaa
gacaaagaggtaaatggagaaaaagctgagccagaggacaacagtgaaaaaccaagtgtc
tccaattgttatagtgagaagaaacctgagaattttacaagacaagaaaaggatgcttca
gatttgattccatctacaagatacaacagtgttggttcagaaaaccctcatgaccttctg
attcaggatgagcaggagcgggaaaatattcattgccataacagggacattgtcttacta
cttaagaacaaggcagtgccaatgcctaatggtgctacagtttctgcctcttccatggaa
agcatgcatggtgaactcctggagaaaacactgtctcaatattatccagaacatgtttcc
atagcaatgcagaagaacacatctcatatcaatgccattaccagtcaggctactaatgag
ttgtcctatgagacaacacattcatcccatacctcagggcagatcacttcctcacagacc
tcaaactctgagctgcctcaagtgccagctgtagtggttactgaggtctacaacacagaa
gactccagtaaaccacctgtattgccaggtagctgttcacttcagaaaccagaactacag
ctacagcaacagattgcaggctatgatcctcaccggttacctgtaggaaacagtaaaatt
catggaagcatagggcaggttcccaaccaagacctctctctaagttccagcagtaacctg
caagctcagagcactgctctggaaaggtactctgagcaagcagaaaataatggtgctttc
tttacacagaactcaacgtttcacaaagattcctccacccctcctgctccagaaatgaac
agtgcactgtctgccgtggtgcaagaaggacaccattcctatgacaacagatgtgatgaa
actcttcctggggagataaaaaatgaagggcaacaggagggaccaatgtcagaaagtccc
agcctcagccaacaacaacttcaccctcagcagagccttctgcgacaggcacaaacatca
caacaagatgtcagtgaaagcaacccgcaagctgctgtggccgcctcaattctgcagcgc
cccgaagaagtgacactggcatcagaacctcccctccaaaacctacacgcacacagaagc
gagggtgagttgcaacaacactatcagcatttcccaggacagagagaacctgagactcct
cctgacaaagaaaaggaccaagtgaaagagcctgtacaacaggctcaacaatattcaaaa
ccagcctggatagaactggtttccacccacttccgccagggagagcctccccaaaagccc
agtgaagcattattgcggtcaattcttcagtaccaggcaagcacagcccaaacagtctat
acaaaacagtatgctggaagtcctgattcattaaaggggccttcaggacaggcccagagc
cagaagataatgcaaaaggaacaacttcctccactgtacaaaagtgagagctcccagctg
cagccgcatcccccagctgaccagcagctgccattccacaaacactcaccgcagccacag
ctcacaaaggtggattcccttctcaagtcgcaagtgcagcaacagccaccacagcagctc
catttccagccaagatcagaacaacaagctgaacagcatttaggggcccccttgaaacag
cagcacttgaatccccagccaggggaaaaggggcaattcttgcattcacatattttgcaa
cagatgctgcaaaaacaggcacatccagtgcaactgccacgcagtccacagctaacccca
aaccagcagcaggctccacaaatgagaactaaagacctgccccaagccatatcccacccc
caaagcaatgctgagcagtctctagacaggaagtccttcaatcaacttaaagcagatgaa
tgtttccagactgggaataagtatggtaaatcagctgcattcccactgcctaaccatcag
ctaggcctagagcaggtacagaccgtgaacaacaaagctcccctttacactcagcaggca
aacgtcagtgtccagcacccttgcccaaacaacaggcacatgatttccgagaagaaaggg
aacgctgcaaatatggaatgctttggagccaacaaaatgcaggacttgcagcacatgcag
tatttttcaaataacttgaccgcaaagcaagatgtgaatcattgttttcaagaacgagag
caacagacgcaacaagcctcagttctgcagctgccacccctccagccctcacagggctat
ggtgctagtctgaaccaagacctcccgagcaaacaagctccccagatccctcagcagtac
ttaccacacagccaaactgccccccacgcccaagaccagagaggctgtcatttgcagtcc
cagacctctaaggattttcaaaagcacgctgctctgcggtggcatctcttgcaaaaacag
gagcagcaagcataccagcaacccaaaactgagactggtcccagtgcagcacgcaagcct
ataaaaattgaggctggcacaaagtctaatgtctgcatgcgcccatcagctggacagctg
gaaaacaaaatgtggaaaaaaacaattaaacaagagaatcagcactttggctgcgagaac
acacaacaaaagagcatcattgagacaatggagcagcagctaaaacagatacaggtcaaa
tcactgtttgatcataagacttttactctcaaatcacccaaacatgtgaaggttgaaaca
gcaggccctattaccatcctatcacgaaataccagtgctgcagattttgacactcaaacc
ccaatcttagatcagcaagcaaacttgtctgctgagaaaaccccgaccaaaagaacagct
ggaactgttctcaataattttttagactcaccttccaagttattggatactcctgtaaaa
aatttattggacacacctgccaaaacccagtatgatttcccatcttgcagctgtgttgag
caaattattgaaaaagatgaaggtcctttctatacccacctaggagccggtcctaatgtg
gcagctattagagaaatcatggaagaaagatttggacagaagggtaaagctataaggatt
gagagggttgtctacactgggaaagaaggcaaaagttctcaaggatgtccaattgctaaa
tgggtagtccgcagaagcagtcaggaggagaagctgctctgcttggtgcgcgaacgagcg
ggacacacgtgtgagacggccgtcatcgtgattctcatcctggtctgggagggaatccca
accagcctggctgataagctctactctgaactcaccgacaccctgaggaagtatggcacg
ctcacgaaccggcgctgtgccctgaacgaagaacggacttgtgcatgccaagggctggac
cctgaaacttgtggtgcttcattttcctttggttgctcctggagcatgtactacaatggt
tgtaagtttgccagaagcaagattccaagaaagtttaagctgatgggagatgacccaaaa
gaggaagaaaaactagaatccaatctgcagaacctgtcaaccctgatggcacctacctac
aagaagcttgcacctgatgcatataacaaccagatcgagtacgaacacagagcccccgag
tgtcgcctggggttgaaggaaggtcgcccattctcaggggtcactgcctgccttgacttc
tgtgctcatgctcacagagacttgcacaatatgcagaacgggagtactctggtttgcaca
ctgactagagaagacaatcgtgaaattggccaaacaccagaagatgagcagctccatgtg
ctcccgttatacaaagtctctgatgtggatgagttcggaagcactgagggccaggaggag
aagaagaggaatggcagcatccaggtccttacctcctttcgacgaaaagtaaggatgtta
gcagagcctgttaagacctgtcggcaaaggaagctagaagcaaagaaagcagctgcagaa
aagcttgcctccttggagaatgggtctagcaaagagagagagaagtctgctgcagcacgc
aacaagcaaggcacctctgaagcagcaggtcatgcaaagcagctggcagatcttttacgt
ctttcaggaccagccacacaacaacagcagcagcagcaacatccacagcgcactctccct
aacaaccctcagtcaaatcccattaactcttactcgggttcaggttctgcaaatctctat
ggaaggttgcctaatccagccaatgcttatccaaactcttcgtacacttcagatccatat
ggagggtccaatcccatgaacctctatacaacctcatcacagtctgtggggtcttatttg
aattcttccagtcccatgaacccttattcagggtctttaagtcaaaataaccaatatccc
ccctaccaatgcaatggaaacatagctatggacaactgcccctcttacttgggctcctac
ccttcccagcatcagcacacggacttgtacagttgccagagccaagaccatatgtctaaa
ctcggtctaccacccattcaaacattataccagcataggtttgggaataatcagagtttt
ggtcccaagtacttgaattatggaaaccaaaatatgccaatagactccttcagtaactgc
accattagaccaaatttacaccacctagggccattttcctcttactccacccatgatgcc
aatggccattttatggaggttgcctcaaggttaaaatctaatctgagtaatccaagcatg
gattatgcctccatgagtaaaacaagtgaacatcatcacatgcaaccccctccacattta
ccacatgactaccattctgctccaaatatgtttagtggtcttcctaattcactgcatctc
cagaataaggataacgaaatgatttcacatgcagttaatggtttgtctaacatgcttcca
ggtcaaaaccatgacaggactactccccagggtggtttagataaaactgatgtgctgaat
ccagaaaaagcagaggatcccgatgaagtctggtcagatagtgagcagaactttctggat
ccagaaattggaggagtggcagttgctccatctcatgggtcaattctcatagagtgtgca
aaacgtgagctccatgcaacgactcccttaaaaaatcccaacaggaaccatcccaccaga
atatcccttgtattttaccagcacaagagcatgaatgagccaaaacatggtctggctctg
tgggaggcaaagatggctgagaaggcaagagagaaagaagaggaatgcgagaagtacggc
ccagactatgtgcctcagaaatcctacggcaaaaaagccaagcgggagcctgcggagccc
cacgagccctctgagccaacgtacgtgcgcttcatcaagtccctggcacaaaggacactg
tcggtcaccacggactccacagtaaccacatctccatatgcctttacacgggttacaggg
ccttacaaccgatatatctga

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