Corvus cornix (hooded crow): 104697123
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Entry
104697123 CDS
T03546
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104697123 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104697123 (SEC24B)
Membrane trafficking [BR:
ccw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104697123 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
104697123
NCBI-ProteinID:
XP_039406945
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All DBs
Position
4:complement(29216177..29262058)
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AA seq
1230 aa
AA seq
DB search
MSAPAGLPPRPAAAFSPGGPGSSLEAAAPASGAPRCQNGPMQSQMQFPSGYGSHLPNYSA
PSGHYSQVPNKAAASHLDNQYRASYYPGYYSAPAQNVMTSVGSNVLNAQESQQLYNNTPP
HSGGSSDRPVQGAISSASYLHMSAQQSYSAFDNHYSTSVSSSVASQGFPLNSDHYAMPVV
SGAMYPNVSYPPVAAGGAYGQTFTSQSLPTVGQFKDTNAFSSQSTSVPHSVQQHVPVGYN
TTLSTVSSAQSVQDNLSRNLTGSVAKVNNQINTGGIDSSQPGHSVSQNVPFAKPGAGTSA
SSAVMSSVRSPAPSLSSKPPSSPSVTQSPEPALQEGMQYGGYVNNQASSAPAPLSSSSDD
EEEDEEDEEAALDSSSTTSSASPVLNNYDALEGGGYPETRSVTSSPVPAPSVLQTSKASK
PFGYGYPALQPGYQNATPPTPVQPSNPGHHPGFQHYPQQYPGVNQLSSSLGGLSLQHSQQ
PESLRPVNLTHDRNILPVSSVPAPVPNLNSDLRKLNCSPDSFRCTLTNIPQTQALLNKAK
LPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEE
FMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTI
VCQSLLENLDKLPGDSRTRIGFITFDSTVQFYNLQEGLSQPQMLIVSDIDDIFLPTPDSL
LVNLHESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRISVFQTQLPSL
GAGLLHSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLA
CMSKYSAGCIYYYPSFHRTHNPAQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFH
GNFFVRSTDLLSLANVNPDAGFAVQMSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTL
CLPVVSSLSDVYAGADVQAVVCLLANMAVDRSVSSSLADARDALVNAVVDSLAAYMSTAS
NLQQSMLIAPTSLKLFPLYILALLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLMKMIH
PNLYRIDKLTDETTIHVNDRVVPQPPLQKLSAEKLTREGAFLMDCGSVFYLWIGKNCDNN
FIKDVLGYPNYASVPQKMTQLPEVDAPSSERTRSFISWLRDSRPLSPVLQVIKDENPAKT
DFFQHLIEDRTEAAFSYYEFLLNIQQQICK
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccgcggggctaccgccgcggcccgccgccgcgttttccccgggcgggcct
ggcagctccctggaggccgcggcccctgcgagcggcgcgccgcgctgccagaacggtcct
atgcagagtcagatgcagttcccctctggctatggctcacatcttccaaactacagtgcg
ccttcaggacactattcccaagtgcccaataaagctgctgcttcacatctggataatcag
tacagagccagttactaccctggttactattcagcaccagcacaaaacgttatgacatct
gtgggtagcaatgtgttgaatgcacaggaatcacagcaattgtacaacaacactcctccc
cattcgggggggtccagtgacagacctgttcaaggagcaatatcatctgcatcctacttg
catatgagtgctcagcagtcatattcagcatttgataatcactacagcacttctgtcagc
tcttcagttgcatctcagggattccccctcaattctgatcactatgccatgcctgtggtt
tctggtgccatgtatcctaatgtttcctatcctcccgtggctgctggcggtgcgtatggg
cagacatttacctcgcagagtctacctactgttggacagttcaaagacacaaatgcgttt
tctagccagagtacatcagtacctcattctgttcaacagcacgttcccgtgggatataat
acaacattatcaactgtttcatctgctcagtctgtgcaagacaacctcagcaggaatctc
actggatcagttgctaaagtaaacaaccaaataaatacaggtggcattgactcttcacag
cccgggcactcagtgagccagaatgttccatttgccaagcctggagctggaacatctgct
tcctctgctgtgatgtcgtcagtaaggtcgcctgctccaagcctgtcttcaaagccacca
tcttcaccatctgttacacagtcaccagagccggcccttcaggaaggcatgcagtatggt
ggatatgttaataatcaagctagctctgcaccagctcccttgtcatcaagttcagatgat
gaggaagaggatgaggaggatgaggaagcagcacttgatagttcctctactacaagcagt
gcctctcctgttctgaacaattatgatgccctggaaggaggtggctatccagagacacgt
tctgtgaccagcagcccagttcccgctccatcagtcctccaaacatcaaaagcttctaag
ccctttggttatggatatccagcactgcagccaggctaccaaaatgcaacaccacctact
cctgtgcagcccagtaatccaggacaccatcctggttttcagcactatccacagcaatat
ccaggtgtgaaccagctgtcctcttccttaggagggttaagtctacagcattctcagcag
ccagaaagcttgagaccagtaaaccttacacatgatagaaatattttaccggtgtcttca
gttccagcacctgtgcctaacttgaattctgatcttaggaaattaaactgcagtccagac
tcatttcgatgtacattgacaaatattccacagacacaggctttgttaaacaaagctaag
cttcctttgggtttgttgctgcatcccttcagggacttaacgcaattaccagtaataaca
tcaagcacaatagtgagatgcagatcctgcaggacttatatcaacccttttgtttctttc
attgatcaaaggcggtggaaatgcaacctgtgctatagagttaatgatgttcctgaagaa
tttatgtataatcctctgacacggtcttatggagagcctcacaaacggccagaggtgcaa
aattctacagtggaattcattgcttcctcagactatatgcttcgtcctcctcagcctgcg
gtatatttatttgttttagatgtgtctcataatgcagtggaagctggatatttgacaata
gtctgccagtcattgctggaaaacctagacaagctgcctggagattcaagaacaagaata
gggttcataacgtttgacagcactgttcagttttacaacttgcaagaaggtttatcacag
cctcagatgctgattgtctcagatattgatgatattttcctacctacaccagatagttta
cttgtaaatctccatgaaagcaaagagctgataaaagatctactgaatgcgttaccaaat
atgttcaccaatactagagaaacacacagtgcattgggccctgctcttcaggctgcattt
aagctgatgtctccaacgggtggtcggatctctgtgtttcaaactcagctaccatctttg
ggagcggggcttttgcattccagagaagatcccaatcaaaggtcaagcacaaaggtggtc
cagcatcttggtccagcaacagacttttataagaagttggcactggactgctccggccag
cagactgctgtggatttatttctcttaagttcacaatattctgatctagcttctcttgct
tgcatgtctaagtattctgctggatgcatctattactatccatctttccatcgtacccat
aatcctgctcaggctgaaaagttgcaaaaagacctgaaaagataccttacaagaaagatt
ggatttgaagcagttatgcgcataagatgtacgaaaggtctttcaatacacactttccat
gggaatttttttgtacgatctactgatttactgtcccttgccaatgtcaatcctgatgct
ggatttgcagtacaaatgtccatagaggaaagtctgactgacacatctttggtttgtttt
caaacagctcttttgtatacttccagcaaaggtgagcgtcggattcgcgtgcacacactt
tgcttgcccgtagtgagttccctgtctgatgtgtatgcaggagcagatgtacaagcagtc
gtgtgcctcttagcaaacatggctgtggatcgctcggtttcatccagccttgcagatgca
agagatgccttagtcaatgccgtggtggactccttggcagcatatatgtcaactgcctca
aatctgcagcaatccatgctgatagcaccaacttccctcaagctctttccactctatatt
ttggctcttctcaaacagaaagccttcagaacaggcacaagtacacgcttggatgatcgt
gtctatgcaatgtgccagatgaagagccagcctcttgttcatttgatgaagatgatacat
cccaacttgtacagaatagacaagttgactgatgagactacaatacatgtaaatgacaga
gttgttcctcagccgcctcttcagaagttgtctgcagagaagttgacaagagaaggagct
tttcttatggattgtggttcagttttttacctttggattggaaaaaactgtgataacaac
ttcataaaagatgtcctcggatacccaaactatgcatcagtgccacagaaaatgacacag
cttcctgaggtggatgcaccttcttcagaaaggacacgatcttttatatcttggcttaga
gatagtagacctttaagtccagttcttcaagtaataaaagacgagaatcctgccaagaca
gatttttttcagcatttaattgaggatcggacagaagcagctttctcatattatgaattc
ctacttaatattcaacagcagatttgtaagtga
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