Corvus cornix (hooded crow): 104697207
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Entry
104697207 CDS
T03546
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104697207 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104697207 (HERC3)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104697207 (HERC3)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
HECT type E3
104697207 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
104697207
NCBI-ProteinID:
XP_039406590
LinkDB
All DBs
Position
4:18543452..18588782
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AA seq
1050 aa
AA seq
DB search
MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLE
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVQKDNREEFVEAYVNYIFNL
SIQEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTPSGEQYLPVAHTCYN
LLDLPKYSSKEVLSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggctactcgtcttatggacaacctgggataggtagcaacctccaggtc
atcattcctgaaccacaggtgtatggattcatccatgatagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaggtgtatacctgtggcttg
aacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagcaaatcggggcg
ctggctgggcagcacattgtgcatgtggcctgtggggagtcgcacagtgtggccctcagc
gaccagggccagctcttctcctggggcgccggcagcgatggacagctggggctcaccacc
atagaagatgcagtgacagtaccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctctcgatgggatccctttggctcaggttgctgcaggcggagcc
cacagttttgccctttctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagagtccccttgtcacgtgaagctgctgcgg
tctcagaaggttgtttacatcagctgtggagaggaacacacagcagtcctgacaaagagt
ggaggggtgttcaccttcggtgcaggttcctgcgggcaactgggacatgattccatgaat
gatgaggtgaacccccgaagagttcttgagctcatgggcagtgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgtaaagtgtccctctcct
gtcaagggtcactgggcagctcataatgggcaactctcagggaaacctgatgcgtgtaaa
taccacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tacgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgatctg
aactccaccagagtgctgtttgagaagctgatgaactcccagcactctattctcctagag
cagatactgaagagctttgaaagctttttgattcctcagctgtccagctcgccaccagat
gttgaggcaatgaggatctatctgattcttccagaattcccacccttccaagactccaag
tattacatttctctgacacttcctctagcaatggctattctgcgcctggataccaacccc
agcaaagtgcttgataactggtggtctcaagtgtgcccaagatacttcctcaggctcgtg
gacctctacaaaggtgcagtggtgtacctcctcagtggaaggaagacgctgctgatccca
gtcctgttcagcagctacattacagctgctctcaggcttctggagaagctccacaaggtg
aatcagaaggttaaacacgtggaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggttcttgcaccaggctggaatgaaagtaagg
ccatctatcatgcaggacgctgtgactctctgctcttaccctttcatcttcgatgctcaa
gctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaacggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaatttagttggtgatgctttgagggagttgagc
atccattcagacattgatttgaaaaaacctctcaaagtgatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttaaaagaactactcaat
cctatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatatac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaacgtg
aagccctgcctagaggatttgaaggagctatcccctacggaaggaaggagtctccagcaa
cttttagattaccccggggaagatgtggaggagacgttctgtttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaatcctg
gtgcagaaggacaacagggaagaatttgttgaagcctacgtaaattacatcttcaacctg
tccatccaagagtggtacacagccttttctactggcttcctcaaagtgtgtggtgggaag
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagcgctgtctataagggagactacacggccacacaccca
actgtgagaatgttctgggagactttccatgcatttcccttggaaaagaagaagaaattt
ctcttgttcctgacaggcagcgaccgcattcccatctacggcatgtccagcctgcgcatc
atcatccagtcgacgcccagcggggagcagtacctgcccgtggctcacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggaggtcctcagcgcccgcctcgtgcaggcc
atcgaccactacgagggcttcagcttggcctga
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