KEGG   Corvus cornix (hooded crow): 104697228
Entry
104697228         CDS       T03546                                 
Symbol
PTPN13
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    104697228 (PTPN13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    104697228 (PTPN13)
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    104697228 (PTPN13)
SSDB
Motif
Pfam: PDZ Y_phosphatase PTN13_u3 PDZ_6 FERM_M FERM_C FERM_N PDZ_2 Tc-R-P KIND DSPc PTP-SAK DUF6288 RA_2 PTPlike_phytase PH_FAN PTP-NADK Peptidase_M13_N SNX17-27-31_F1_FERM
Other DBs
NCBI-GeneID: 104697228
NCBI-ProteinID: XP_039406504
LinkDB
Position
4:complement(15617139..15730559)
AA seq 2519 aa
MHVSLAEALEVRGGPLQEEEIWAILNQSAESLQELFRKADPAALGFIISPWSLLLLPSGS
VSFTDENVSQQDLRAFTAPEVLQNHSLSSLSDVEKVHIYSLGMALFWGADHEVPQSQPIK
LGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKQLVRLVLGSLSGM
DQLSCNGDRKLQPDRSQAIRERLRGKGLPTGKTLAVDAPDGHRAHFSQQTTLNKGLSKSM
GFLSIRGTQDEEEFFQGISADYSSGQEDAFCPHRCKTSEFEKKCHLHTDVPPKRKIWASS
TDLLCTTDKAAERDHAGGSHRHSHQCETFTVRTSTTARNKEARYSDGSIALDVFGPQKLD
QTRHMPETSASAAISSAFDRIRERQKKLQLLREAMNVEEPLRRYKSYHSDVYSTSSESPS
VISSEPDFRQVRRNEGFKRDDAGGVLSGADDISTSSQANSQRTRQHEAPFEGKLISQEVM
LKRQEEEMVQLQARMALRQSRPNLYPGDAIRSSVLDITRDPLREIALETAMTQRKLRNFF
GPEFVKMTIEPFISLDLPKSILTKKGKNDDTRRKVNVMLLSGQKLELTCDTKTICKDVFD
MVVAHIGLVEHHFFGLATLRDNEFFFVDPDIKLSKIAPEGWKEEPKKKNKPPVNFTLFFR
IKFFVDDVSLIQHTLTCHQYYLQLRKDILEDRMHCDDETALLLASLALQAEYGDYQAEVH
GLSYFRLEHYVPARVMEKLDLSYIKEELPKLHSTYVGASEKETELEFLKLCQRLTEYGVH
LHHVLPEKRSQTGILLGVCCKGVVIFEVHNGARTPVLRFPWRETKKISFSKKKITLQNTS
DGIKHAFQTDNSKTCQYLLHLCSSQHKFQLQMRTRQSNQDTQDIERASFRSLNLHADSVK
GFNMGRAISTGSLASSTLNRLAVRPLSVQAEILKRLSCSELSLFQPLPGSTRDKNEKTPW
EERPRVMSKSFHDLSQSHISVYPPRKNVITTLDSSPKKIEDIMGRVFQQMPKFDNGSAAG
ALKPSNSKSHAGLSRSPERKKNESDSSSIEDTGQAYVVGVSMNTSENHLSSAALKESADS
LQTTQNRVATPEREITLVNLKKDEKFGLGFQIVGGEKTGKLDLGIFIHSVIPGGPADLEG
TLKPGHRLISINSTSLEGVSHHAALEILDSAPEDVTLVISQPKDKLSKASSNTAHISNGA
RGYLRRPSSVQDNEAESSSEEHNRSRGHQRPVSGSLSGLSGGKRDGSMSSQDSRTESASL
SQSQPAGFFGKRPSGRAQQDAQQYSDSQAGGSKVIEKRRSSSDSTRAKNKRPGVVEPLEY
SDRGDSDMDEATYSGSQEQQPAKKDSSSWNTANKVNSKKVSATFLKPGDIFEVELAKKDN
GLGISVTVLFDKGGVNTSIRHGGIYVKAIIPKGAAEADGRIEKGDRVLSVNGISLEGATH
KQAVETLRNTGQVVHLLLEKGQLSGAKAHAPVTPQCTLPNQVGQCEQQEKPATESTNAKD
YSFVTADNTFEVKLLKNSSGLGFSFCREDNLTPEQLGSTIVRVKKLFPGQPAAESGQIEI
GDVILKVNGASLKGLSQQEVISALRGTSPEVSLLLCRPPSGILPDIDPSLLTPIHSPQQV
FPEVSREVSGPSNGEQGDSSDENETTDLSKKRLKSPSRRDSYSDSSRSGDEEVMDSAAQV
GLGWSSALYQSSGEAEAQAQSQYEAHPGQKDAVRTILYPDQEAPGKAELEDSDLPLDLPV
IPTCRTVPDVTTSILINDCYATPVSELTSQLGEIDSLLTQLEKNAEEYEPEVELRVTLTK
SEKGSLGFTVTKGNDNVGCYIHDIVQDPAKSDGRLRPGDRLIKVNDIDVTNMSHTDAVSF
LRAAPRTVRLVLGRVLELPKMPVLPHLLPDITLMCHKEELGLSLSGGHDSLYQVVYISDI
LPKSVAAREESLHVLDIIHYINGVSTQGMTLKEAKRMLETYLPTVVLKATRDGHAVFPKS
KSPENSNPWPLKANGCSCGDPCDKMEKTTDAYGPKVNGNGILGPSQGNTENNIHHTKALM
NLSGAADAPSLGLANEISDFSKHVDKSGTEVPDDEYYDEDDHNEVVQYLLDVVDEEAQNL
LNRVNATSGAQSLLHLKKAVSENHLPVEMNGKVTEDKSEDTDYDGSSLPEDFSEPTHVNG
CEDYCGVKAVPERSPPQPSLSQADEDEITWGSDELPIESVSQERVNKDFPLVTNEEISAL
PTVNVLPGGKYSGAKLKSVIRMLRGLLEQGVPSKEIENLQELKPLDQCLVGQAKENRRKN
RYKNILPYDTTRVPLGVEGGYINASFIHMPVGNEEFVYIACQGPLPTTVADFWQMVWEQN
CTVIAMMTQEVEGEKIKCQRYWPDVLNKTTMINDRLRLALVRLQQLKGFIIRVLELEEIQ
TGEVRHISHLNFIAWPDHDTPSQPDDLLTFISYMRRVHKSGPIITHCSAGIGRSGTLICI
DVVLGLISRDLDFDISDLVRTMRLQRHGMVQTEDQYIFCYQVVLYVLNHLQHEEQQRDK
NT seq 7560 nt   +upstreamnt  +downstreamnt
atgcatgtgtcactagcagaggctctggaggttcgggggggaccattgcaggaagaggaa
atatgggctattttgaatcaaagtgcagagagccttcaagaactattccgaaaagctgat
cctgctgctctgggattcatcatttctccatggtctctcctgttgcttccatctggcagt
gtgtcatttactgatgaaaatgtgtcccaacaagacctgcgagcattcacagcaccagag
gttctgcagaaccattcgctgtcatccctgtcagatgttgaaaaggtccatatttattct
cttggtatggcactcttttggggagctgaccacgaagttcctcaaagtcagcctatcaag
cttggagaccatctcaacagcatactgctgggcatgtgtgaggatgtcatttatgcccgt
gtgtctgtacggactgttctggatgcctgcagtgcccacataaggaacagcaactgtgcc
ccttctttttcatatgtgaagcagctggtcagacttgttctgggaagcctgtctgggatg
gatcagctgtcttgtaatggagatagaaaattgcagccagacaggagccaggctattcgg
gagaggctgaggggaaaagggcttcccacaggaaaaacactggcggttgatgcacctgat
ggacacagagctcacttctcccaacagaccacccttaacaaaggacttagcaagtctatg
ggatttctgtccattagaggaacacaagatgaggaagagtttttccagggcatttctgca
gattacagttcgggtcaggaagatgctttctgtcctcataggtgtaaaaccagtgagttt
gagaaaaaatgtcaccttcacacagatgttcctcccaaacggaaaatatgggcttcttcc
acagatttgctttgcactactgacaaggcagctgagagggaccatgctggaggctctcac
aggcacagccatcagtgtgaaacgtttacagtacggacttctactactgccagaaacaag
gaagcgagatactctgatgggagcatagcactggatgtcttcggaccacagaaactggac
caaacacgccacatgcctgagacatcagcttctgcagcaatatcaagtgcctttgacagg
ataagagagagacagaagaagttgcagcttctgagggaagctatgaatgtagaagagcct
ttgagaaggtacaagtcttatcacagcgacgtttatagtacttcgagtgaaagtccatct
gttatttcttcagaaccagatttcaggcaagtgagaagaaatgaaggtttcaagagagat
gatgccggtggtgtgttatcaggtgctgatgatatctccacatcaagtcaagctaattct
cagagaacaaggcagcatgaagcaccatttgaaggcaagctaataagtcaagaagtgatg
ctgaagcgtcaggaagaagaaatggtgcaactgcaagctaggatggctctgaggcagtcc
cggcctaacctctacccaggggatgcaattagatcctcagtgcttgacatcaccagagac
ccactgagggaaatagccctggaaacagccatgacacaaagaaaactgaggaatttcttt
ggcccagagtttgtgaaaatgacgattgagccattcatctccttggatctaccaaagtct
atcttgactaagaaaggcaagaatgatgacaccaggcgaaaagtaaatgtgatgcttctg
agcgggcagaagctggagctgacctgtgacaccaaaacaatatgtaaagatgtctttgat
atggtcgttgcccatattggcttggtggagcatcacttctttggattggctactttaaga
gacaatgagtttttcttcgtggatcctgacataaagctaagtaaaatagctccagaagga
tggaaggaagaaccaaagaagaagaacaagcctcctgtcaacttcactctgttttttcgc
ataaagttttttgtggatgatgtcagtcttatacagcacacgctgacctgtcaccagtac
tacctgcagctgcggaaggacatcctagaggacaggatgcactgcgatgatgaaacagcc
ttattattagcatccctagctctccaagctgagtatggagattaccaggcagaggtgcac
ggcttgtcctatttcagactagaacattatgtcccagcaagagtgatggagaagctggat
ctatcctacatcaaggaggagctgccaaaactgcacagcacttatgtgggtgcctctgaa
aaagagacagaattagaatttctgaagttgtgccagaggctcacagaatatggggttcac
cttcatcacgtgctgcctgagaagagatcccaaacaggcatccttctgggagtgtgctgc
aaaggagttgtcatttttgaagttcataatggtgcccgtacacctgtactgcgcttccca
tggagagagacaaagaaaatatcctttagtaagaagaaaataactctgcagaacacatca
gatggcatcaagcatgcctttcagactgacaatagtaagacttgccagtaccttttgcat
ctctgctcttcccagcataagttccagctacagatgagaaccaggcagagcaaccaagac
actcaggacattgaaagggcttcatttaggagcctgaaccttcacgcggactctgtcaaa
ggcttcaacatgggccgagccatcagtactggcagcctggccagcagcactctgaacaga
cttgctgttcgacccctgtctgtccaagcagagatcctcaagagactgtcctgctctgag
ctctcgctcttccagccacttcctggctctacaagggacaagaacgagaagactccgtgg
gaggaaagacccagagttatgagcaagtcgtttcacgatctgagtcagagtcacatctct
gtttaccccccaaggaaaaatgttattactactttggactcttcccccaaaaaaatagaa
gatataatgggcagggtctttcagcaaatgccaaaatttgataatggatcagcagcagga
gcattaaaaccgagcaattcaaaatctcatgcaggtttaagtagaagccctgaaagaaag
aaaaatgaatcagactcatcatccattgaagataccggtcaagcctatgttgtaggtgtt
agcatgaatacttcagaaaatcatctgtcatcagcagcattaaaagagagtgctgactct
cttcaaacaacacagaacagagttgccacgccagagagagagatcactttggtgaacttg
aaaaaggatgaaaagtttggcttaggctttcaaatagtcggtggagagaagacagggaaa
cttgatctgggaatttttattcattcagttattcctggagggccagctgatttggaagga
actctaaaaccaggacaccgcctcatatccataaacagcacgagtttggaaggcgtcagc
caccatgcagcgttggaaatcctggacagtgctcccgaggacgttacgcttgtgatctcg
cagcccaaggacaagctgtccaaagcatcatctaacactgctcatatcagtaatggagcc
aggggttacttgaggaggccctcttcagtgcaggacaacgaggcagagtcctcttcagaa
gaacacaaccggtcccgtggtcaccagaggcctgtttcgggaagcctgtctggattgtcg
ggaggcaagcgggatggcagcatgagctcccaggattccaggaccgagagcgccagcctg
tcccagagccagccagccgggttctttggcaaacgtccaagtgggagagcccagcaggat
gcccagcagtacagtgattcccaggctgggggctccaaagtgatcgagaagagaagatcc
tcatcggacagtactcgagcgaaaaataaaaggcctggagtagtggagcctctggaatat
tctgaccgaggggattctgacatggatgaagcaacttactctggcagtcaggagcagcag
ccagctaaaaaggattcttcctcatggaatacagcaaacaaagtgaattctaaaaaggtt
tctgcaacatttcttaaacctggagatatctttgaggttgaactagcaaaaaaagataac
ggcttgggaataagtgtcacggtactgtttgacaagggtggtgtaaatactagcataagg
catggtggtatttatgtgaaagcgattattcccaagggagcagctgaagcagatggcaga
atagaaaaaggtgaccgtgtgctctctgtcaatgggattagtttggaaggagctacccat
aagcaagctgttgaaacactgagaaacactggccaggtggtgcacctgctgttggaaaaa
ggtcagctttcaggggccaaggctcatgctccagtgacaccacagtgcacgctcccaaac
caggtggggcagtgtgagcagcaggagaagccagcaacagaatctacaaatgccaaagat
tacagctttgtcactgcagacaacacatttgaggtaaagctcttgaagaacagctcgggc
cttgggttcagtttctgccgtgaagataaccttaccccggagcagctgggatcaactatt
gtgagggtgaagaagctcttccctgggcagccagctgcagaaagtgggcaaatagagatc
ggggacgtcattctgaaagtgaacggggcatcgctgaagggtttgtcccagcaggaagtc
atctctgctctgaggggaacgtctccagaggtttctcttctcctttgccggccgccatct
ggaatactgccagacatcgatccttcattgctgactcccatccattcaccccagcaagtt
tttccagaggtcagcagagaagtctctggtccatcaaatggagaacaaggtgacagctca
gatgaaaatgaaactactgatctgagcaagaaaaggctgaagtctccctccagaagagac
agctacagtgacagcagcagaagtggtgatgaggaggtgatggactcagcagcgcaggtg
ggccttggctggagttctgcactgtaccagagctcaggggaagctgaggcacaagcacag
agtcagtatgaggcacaccctggtcagaaggatgctgttcgcaccatcctgtatcctgat
caagaggctcccggcaaggcagagcttgaggacagtgatctgcctttggatttgccagtg
atcccaacctgtagaactgtacctgatgttaccacgtccattttaataaatgactgttat
gctactcctgtctctgagctgacttcacaactgggagaaatagattcattactcacccag
ctggaaaaaaatgctgaagaatacgagccagaagtggagctccgagtgactctgacgaag
tcagaaaagggcagtctgggttttacagtgaccaaaggtaatgataatgttggctgctac
attcatgacatcgttcaggatcctgccaagagcgatgggagactacggcctggagaccga
ctgataaaagttaatgacatcgatgtcactaacatgagccatactgatgcagtcagcttt
ctccgtgctgcgccgaggactgtcagattagtgctggggcgtgttctggagttaccaaag
atgccagtgttgcctcatttgctgcctgatattacactaatgtgccataaggaggagcta
ggtttgtcattatcaggaggccatgacagcctttatcaagttgtgtatattagtgacatt
ctccccaaatcggttgctgccagagaggagagtctccatgtattagatattatccattac
attaatggagtaagcacacaaggaatgactctgaaagaagccaaaagaatgctggaaaca
taccttccaacagtggtgctcaaagcaaccagagatggccatgcagtgttcccaaaatcc
aaaagccctgagaactcaaatccgtggccactgaaagctaatggctgttcctgtggtgat
ccctgtgataaaatggaaaagacaactgatgcttatgggcccaaggtcaatggcaatggc
atcctaggaccttctcagggaaatacagaaaacaatatccatcacacgaaagcactaatg
aacctctcaggagcagcagacgcaccttcccttggacttgccaatgagatatcagatttt
tctaaacacgttgacaaatcaggaacagaggttccagatgatgagtattatgatgaggat
gaccacaatgaagttgtccagtatctgttggatgttgtagatgaggaagcccagaacctc
ttaaatcgggttaatgcgacttcaggggctcagagtcttctgcatctcaagaaggctgtg
tcagaaaatcacctgccagtagagatgaatggaaaggtgacagaagataagtctgaggac
acagactatgatgggtcatctttacctgaagatttttcagagccaacacatgtaaatggt
tgtgaagactattgtggagtaaaagctgtgccagaaagatctcctccacagccttccttg
agccaggcagatgaggatgaaatcacgtggggaagcgatgagctgccgattgaatcagtc
agccaggaacgtgtgaataaagatttccccctagtgacaaatgaagagatctctgcactc
cctactgtgaatgtgctccctggaggcaaatattcaggagccaagttgaagtcagtgatc
agaatgttgcgtggattgctggaacagggagtcccttctaaagagattgaaaaccttcag
gagttaaaacctctggatcagtgtttggttggacaagcaaaggagaacaggagaaagaac
agatacaaaaacatacttccttatgacaccaccagagtccctcttggtgttgaaggtgga
tacatcaatgccagcttcattcacatgcccgtggggaatgaggagttcgtttacattgca
tgccaaggacctcttcctactactgtagcagatttctggcaaatggtttgggaacaaaac
tgtactgtgattgccatgatgactcaggaggtcgagggagaaaagataaagtgtcagcgt
tactggccagatgtgctcaataaaaccaccatgatcaatgacagactacggcttgctctt
gtgagacttcagcagctgaagggctttatcatcagagtgctggagctcgaagagattcag
acaggtgaagtgcggcacatttcccacctgaacttcatcgcctggcctgaccacgacacc
ccttcccagccagatgatttgctcaccttcatctcttacatgcggcgcgtccacaagtcg
ggacccatcatcacgcactgcagtgcaggcatcgggaggtcgggcaccctcatctgtata
gatgtggttctggggctgatcagcagagacctcgactttgacatctcagacctggtgcgc
acgatgcgtctgcagagacatggaatggttcagacagaggatcagtacattttctgctat
caagttgtcctttatgtcctgaatcatctccaacacgaagaacaacagagagacaaataa

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