Corvus cornix (hooded crow): 104697229
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Entry
104697229 CDS
T03546
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104697229 (AFF1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
104697229 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
DUF484
Motif
Other DBs
NCBI-GeneID:
104697229
NCBI-ProteinID:
XP_010410274
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All DBs
Position
4:complement(15528062..15596325)
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AA seq
1233 aa
AA seq
DB search
MAAQSSLCNEDRNLLRIREKERRSQEALEDKKQFSEKTPLFAEPYKTNKEDELSSRIQNM
LGNYEEVKEFMSNKSCQNLIGIPKSVAPLFPPGQPDHPYFPEKAIRTLPSSFQHPNRRPP
VGPMVVAPRPPSHSSHYQKAQSGTEPPSALHTKSRSLPSARSHGQEHGRGGRDNQAGIPH
SHNDKPGSGEGRAHGLQASPLALSPFLPCLLSSPVAPLSPLHSSQHINSRSQNSSKSYGS
TYSQTKSLQDLVTGSQEKESWESPVVTLTSTTQPSSQTFPPSLASKASAMQQKPTAYVRP
MDGQDQAPFESLELKPLLEEYHEGPKEDVSDLKAKVKAELSKLETSSEPKEETDEDLSDL
KAKAKAELSKLEAPSEPIEQTNPIDVQSIEEILREMTRSWPPPLTALNTPTKAEPSKFPF
PTKEFQPEGSVAKDQKQYGAPSETLPSSQPRTSMLQDDLQLSDSEESGDDQVVEKSPSSL
AAPRYSSLQSQPKSVASAHSSSSESGSTSDSDSSSDSETESHSSDNEVNDPPRAPALEPE
PPTSNKWQLDNWLTKVNPPAVPTESLSEIACGDGREEGKKQEWGISSNSSQQHAELREPP
HKSQVARAPQEAPLPTKRSCQKPPAHAEEPSPRQTVGVKRPSKPLVHEGPKRGLKVESEP
GPLEAADQSSRDKLKVKKTLKTKSTDRKDLKPGLQEPSEKKKDKGSHQANAKPFLDPKLM
GDAQAHDALSPLPQGQGTTPIRTSSHRPQDLHKEKLPLPLGEKLLSPVRDPPTRERLVVK
IDLCHLEKVPQPPRKDGHQRKAETKDLSGGRKQNLKRKATDTPEESLGKKKREEKEETDR
KKMKSEKETKSLQSSASKDSSKLKASKASSETQKKDVLPPLPAMSTAQPAPKSAKMTQKR
PRNETDELPAMDNPARNKSNHKDPLFPKHRKVEGNHMELSKDIKGSADEVTKPFPVPSLP
NGTSKPRRPLLKFEKQHSKEYYIEQAQRLKHKADAMTDKTGKALQYLEAALLFIEYGIAL
ESDVLEPKSAYSILSDTIVLIKFIMTLKPFADSSVSSHGKIFAVLRMRCQSILHMAMFGY
KKDTAMRYSRLLNDHFKSNFRVIQAPSPGVARSTGLPSPLSPIPSPAGSVSSQPGSNDSS
SIGHNGIGNSTGSTVTVSCHISSVTSSYVNITSYILHAYEIWEKADALARKNKEFFAELS
RVTSALALTSSLTDLVHYIRQGLQWLRLEANMP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagtcgagcttgtgcaatgaggacagaaacttgctgcggattcgagaaaaa
gagagacggagtcaggaggcactggaagacaaaaaacagttctctgagaagactcccctc
tttgcagaaccttacaagactaataaagaagatgagttgtcaagccgaattcagaacatg
ctgggcaattatgaggaggtcaaggagttcatgagcaacaaatcctgtcagaaccttata
gggattccaaagagtgttgcccctctgtttccccctggacagcctgatcacccatacttc
cctgagaaggccatccgtacactgccatcttcattccagcacccgaaccgccgtccaccc
gtgggacccatggttgtagcccctcgtcctccaagccactccagtcactaccaaaaggca
cagtcaggaacagaaccaccttcagctttgcacaccaagagccgcagcttacccagcgct
cggagccacggtcaggagcacggccgtggtggccgggacaatcaggcaggtattccccac
agccacaatgacaagcctgggagtggggaaggtcgtgctcatggcctgcaggcctcccct
ctggcgctttccccgttcctgccatgtttgttgtcttctccagtggcacccctgtcacct
ctacattccagccagcatatcaattccaggtcacagaacagcagcaaaagttatgggtcg
acctacagtcaaaccaaatcattacaggacttagtgacaggatcgcaggagaaggaaagt
tgggagagcccagtcgttaccttgaccagcaccactcagccttcctctcagacttttccc
ccttctttggcatcaaaagccagtgcaatgcagcagaaaccaactgcctatgtcagaccc
atggatggccaagatcaggcaccatttgaatccctggagctcaaacctctcctggaggaa
taccatgaaggacccaaagaagatgtctcagatttgaaggcaaaagttaaagctgaacta
tccaagttggaaacctcttctgagcccaaggaagagaccgatgaagatctctcagatttg
aaggcaaaagccaaagctgaactatccaaattggaagctccttccgagcccatagagcaa
accaaccccattgatgtgcagtccattgaagaaattttgagggaaatgacccgctcttgg
ccacctcccctgacagctcttaatacgcctactaaagcagagccttccaaatttccattc
ccaacaaaggaatttcaacctgaaggatctgtagcaaaggatcagaagcagtatggagca
ccttcagaaacgttgcctagttctcagccaagaacatcaatgctccaggacgacctgcaa
ctcagtgatagtgaagagagtggtgacgaccaagttgttgaaaagtcaccttcttcactt
gctgctccaaggtacagttccttacagtcccagcccaagagtgtggcatcagcacattcc
agcagctcggagtcagggagcaccagtgactcagacagctcctcagactcggagacagag
agccactcgagtgacaatgaagtgaacgaccctccaagagcaccagcacttgagcctgag
ccaccaacttctaataagtggcagctcgacaactggctgaccaaggtgaatccaccagca
gtgccaacagagagcctcagtgaaattgcctgtggggatggacgtgaggagggcaagaaa
caggagtggggcatcagcagcaattcctcccagcagcatgctgagctgagggagcctcct
cacaagagccaagtggccagggctcctcaggaggctcctcttccgaccaaacgcagctgc
cagaagcctcctgcacatgctgaggagccctcgcccaggcagactgtgggggtcaaaagg
cccagcaagcccctggtgcacgagggacccaagagaggcctgaaggtggagagtgagcct
ggtcctctggaggctgcagaccagtcttctagggacaagctgaaggtcaaaaaaacactg
aagacaaaatccactgacagaaaagacctgaagccaggacttcaagagccctctgagaaa
aaaaaggacaagggctcccaccaggccaacgccaagcccttcttggaccccaagctcatg
ggagatgcccaggcacatgatgctctcagtccccttcctcagggccagggcacaaccccc
atcaggaccagcagccacaggcctcaggatttgcacaaggagaaactacccttgcctctt
ggggagaagttgctctcaccagtgagggaccccccaacccgtgagcgccttgtggtgaaa
atagatctctgtcacctggagaaagtccctcagccccccaggaaagatggacaccagagg
aaagcagagaccaaggacctttctggtgggaggaagcagaatttgaagaggaaagccacg
gacactcctgaagagtcccttggaaagaagaagagggaagagaaggaggagactgatcgg
aagaaaatgaaatcagaaaaagaaacaaaatcattgcagtcttcagctagcaaagactcc
agcaaattgaaagcatcaaaagcttcctctgaaacccagaagaaagatgtgctcccacca
ctgccggccatgtctactgcacagcctgcaccgaagtcagccaagatgacccaaaagaga
cccagaaatgagactgatgagctgcctgccatggataaccctgccaggaacaagagcaac
cacaaggatcctttgtttcccaaacacaggaaagtggagggaaatcatatggaactgtca
aaggacatcaaaggatctgcagatgaggtcacaaagcctttcccagtgccttctttgcca
aatggtacctctaagccaaggagacctctgctcaagtttgaaaagcagcattcaaaggaa
tactacattgaacaggcccagaggctaaagcacaaagctgatgcaatgactgacaagact
ggaaaggccttgcagtacctggaggctgcccttttattcatcgaatatgggattgccttg
gaatcagacgtgctggaaccaaaatcagcttacagcatactcagtgacaccatagttctc
atcaaattcattatgacactgaaaccatttgcagactcctcagtctcttcacatggaaaa
atctttgctgtgttacgcatgcgctgccagtccattctgcacatggcaatgtttgggtac
aaaaaagacactgcaatgaggtattccagactcctgaatgaccacttcaagagtaatttc
agagtaatacaagcaccttctccaggtgttgcaagaagcacaggcttgccttctcctctc
tctccaataccctctcctgctggatctgtgagttctcagccgggatcaaatgatagcagc
agcattggccacaatggcattggcaacagcactggctctactgtcactgtctcctgtcat
atctccagtgtcacctcctcctatgtcaacatcacctcctatatccttcatgcatatgaa
atttgggaaaaggctgatgcactggccagaaagaataaagagttttttgctgagctcagc
agagtgacgagtgctctggcactgaccagtagcctgacagacctggtacactacatcaga
cagggattacagtggctgagactggaagcaaatatgccttaa
DBGET
integrated database retrieval system
