Corvus cornix (hooded crow): 104697231
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Entry
104697231 CDS
T03546
Symbol
ABCE1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccw03009
]
104697231 (ABCE1)
Ribosome biogenesis [BR:
ccw03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
104697231 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
AAA_15
Fer4_6
AAA_29
RsgA_GTPase
AAA_16
nSTAND3
NACHT
LdpA_Fe-S-bd
AAA_30
Fer4_10
Fer4_2
AAA_23
SRP54
TsaE
ORC-CDC6-like
Fer4_21
Fer4_16
Fer4_4
Fer4_7
Fer4_9
AAA_5
AAA_19
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
104697231
NCBI-ProteinID:
XP_039407321
LinkDB
All DBs
Position
4:complement(15175006..15192158)
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AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQSKIAWISETLCIGCGI
CIKKCPFAALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQTVVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELSIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLTPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPX
KNTLANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaattaacaagaattgctatagtcaaccatgacaagtgtaagccaaagaaa
tgtcgtcaggaatgcaagaagagttgtcctgtggttcgaatgggaaaactttgcatagaa
gtcacatcacagagcaaaatagcatggatttcagaaacactttgtattggttgtggtatt
tgcatcaagaaatgcccttttgcagctttgtcaattgttaacttacctagcaacctggag
aaagaaacaacgcatagatactgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggtgaagtgctgggattggttggaaccaatggtattggaaaatcaactgccttg
aaaattttagcaggaaaacagaagccaaatcttggaaaatatgatgatccacctgactgg
caagaaattttgacttacttccgaggatccgaattacaaaattattttaccaagatcctg
gaagatgaccttaaagctatcattaaacctcagtacgtggaccagatccctaaagctgca
aagggaacagtgggatcaattctggataggaaggatgaaactaagacacaaactgttgta
tgtcagcagcttgacttaacacacctgaaagaaagaaatgttgaggacctttcaggagga
gaacttcagagatttgcttgtgcagttgtttgcattcagaaggctgatatcttcatgttt
gatgaaccttccagctacttggatgtcaagcagcgattgaaggctgccattactattcgg
tccctgataaaccctgacaggtacattattgttgtagagcatgatctaagtgtgttagat
tatctctctgactttatctgctgcctgtatggtgtgccaagtgcttatggtgttgttacc
atgcctttcagcgtaagagaaggcataaacattttcctagatggctatgttccaacagaa
aatctaaggtttcgagatgcatctctggtatttaaagtagctgagacagctaacgaagaa
gaggttaaaaagatgtgtatgtacaaatatccaggaatgaaaaaaaagatgggagaattt
gaactatccatagtagctggagaattcaccgattctgaaattatggtgatgttaggggaa
aatggaactggcaaaacaacatttatccgaatgcttgcaggaagacttacacctgatgaa
ggaggtgaggtcccagtcctaaatgttagctacaaaccacagaaaatcagccctaaatct
acgggaagcgtccgtcagctgctgcacgagaagatcagagatgcctatacacacccccag
tttgtaactgacgtgatgaaacctcttcagatagaaaacatcattgaccaggaggttcag
acactgtctggtggtgagttgcagcgtgtggcattagctctttgtctgggtaaacctgca
gatgtttatctgattgatgagccctcagcatatttggactctgaacagcgtctgatggct
gccagagtcattaaacgtttcattctccatgctaaaaaaacagcttttgtggtagaacat
gattttatcatggctacatatcttgctgatcgtgtgattgtttttgatggcattcctntc
aaaaacacactggcaaacagtccacagactcttttggctggaatgaataagtttttatct
cagcttgaaatcacttttagaagagaccccaacaattacagaccaagaataaacaaactc
aattccatcaaggatgtggaacaaaagaagagtggaaactacttcttcctggatgactaa
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