Corvus cornix (hooded crow): 104697237
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Entry
104697237 CDS
T03546
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104697237 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
104697237 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104697237 (LSM6)
03041 Spliceosome [BR:
ccw03041
]
104697237 (LSM6)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104697237 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
104697237 (LSM6)
Spliceosome [BR:
ccw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104697237 (LSM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104697237
NCBI-ProteinID:
XP_010410297
LinkDB
All DBs
Position
4:complement(14810206..14816187)
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacggaagcaaacccccagtgacttcctaaaacaaatcattggaaggccagtt
gttgtaaaattaaattctggagttgattatcgaggtgtcctggcttgcctggatggatat
atgaacatagctctggagcagactgaagaatatgtaaatggacaattaaagaacaagtac
ggggatgcatttatccgaggaaataatgtgttgtacataagcacccagaagaggaggatg
tga
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