Corvus cornix (hooded crow): 104697256
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Entry
104697256 CDS
T03546
Symbol
PKD2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-2
KO
K04986
polycystin 2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104697256 (PKD2)
04040 Ion channels [BR:
ccw04040
]
104697256 (PKD2)
Cilium and associated proteins [BR:
ccw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104697256 (PKD2)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104697256 (PKD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
104697256
NCBI-ProteinID:
XP_039406873
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All DBs
Position
4:12212945..12234814
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AA seq
836 aa
AA seq
DB search
MDVEWGSRTASSLGSGAGGPTGGGRRARWGPAGRGGAXGPGRLPGPPDGAAPRRAAWAKR
LARRLRGLWGTRLMEESNTSRERYLKSVLRELITYMIFLVVLCVLTYGTVSSSMYYYTRV
MSQLFLETPVSKTERTDFKTLSTMDDFWKFAEGPLLDGLYWEMWYNNKTMAENKSFIYYE
NLLLGVPRIRQLKVRNGSCSIPEDLKDEIKDCYDVYSVANEDTAPFGLRNGTAWTYTSEK
DLNGSSHWGLIATYSGAGYYQDLSRTREVTALQIASLKKNLWLDRGTRAAFIDFSVYNAN
INLFCVVRLLVEFPATGGLVTSWQFQPVRLIHYISTFDFFLAACEMSFCLFVLYYMVEEV
LEIRIHRLQYFRSLWNCLDILIIVLSVVAIGISIYRTSTVDMLLKKLLEDQNSFPNFEPL
AYWQMQFNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFAIMFFIIFLAY
AQLAYLVFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRILGPIYFTTFVFFMFFI
LLNMFLAIINDTYSEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTTVDDISESLRQ
GGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDL
ERSSLPRPLSSRSFPRSLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRRVDRMEH
SIGSIVSKIDAVIVKLEAMERAKLKRRDVLGRLLDGVTEDERLGRDNEIHREQMERLVRE
ELERWESDDTASQMSHRLGTPLGLNGQPRSRNSRPSSSQSDGIDVGAGNGGNNIHV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagtggggcagccgaaccgcgtcgtcgctgggcagcggcgcggggggcccg
acgggcggcgggcggcgggcgcggtggggccccgcggggcgcggcggggccngagggccg
ggccgcctcccggggccgcccgatggagccgcgccccgcagagcggcctgggccaagcgc
ctggcgcggagactgcgaggtctgtggggcacaagactcatggaagagagcaacaccagc
agagagcggtacctgaaaagtgttttacgggagctgatcacatacatgattttccttgtg
gtcctgtgtgtcttgacttatgggacagtgagttccagtatgtactattacacaagggta
atgtcgcagctcttcctggaaacacctgtgtcaaaaacggagagaactgatttcaaaact
ttgtccacgatggatgacttctggaagttcgcagaaggccctttgctggatggtctttac
tgggagatgtggtacaacaacaaaaccatggcagaaaacaaaagcttcatttattatgag
aacctgctcctaggggtgcctcgcattcggcagctgaaagtcagaaatggttcgtgctcc
atacctgaagatttaaaggatgaaatcaaagactgctatgatgtctattctgtagctaat
gaggatactgctccttttggactccggaatggaactgcctggacatataccagtgaaaag
gatttgaatgggagcagccactggggtttgattgccacatacagcggggctggttattac
caagacctctcgaggaccagagaagtgacagctctgcagattgcgagcctgaagaagaac
ctgtggctggacagagggaccagagcagctttcattgatttctctgtgtacaatgcaaac
atcaacttattctgcgtggtcaggttgctagtggagtttccagccactggaggcctggtt
acatcttggcagtttcagccagtgaggctgattcattacatctccacttttgattttttc
ctggcagcctgtgaaatgtcattctgtctttttgttctctattatatggtggaagaggtc
ttagaaattcgcattcatagactgcagtatttcagaagtctttggaattgccttgatatc
cttatcattgtgctgtctgtggtagctataggaattagcatctataggacatcaactgtt
gatatgctcctgaagaagctgctggaagatcagaactcattccccaattttgaacctttg
gcatactggcaaatgcaattcaacaacattgctgcagtcactgtgttttttgtctggatc
aagcttttcaaatttgttaacttcaacagaacaatgagccagttatccaccacgatgtct
cgctgcgtcaaagatgtcattggctttgccattatgttttttattattttcttagcatat
gctcagttggcctatcttgtcttcggcactcaaattgatgacttcagcactttccaggac
tgcatatttactcagttccgcatcattttgggagacttcaacttcacagaggttgaagaa
gcgaatcgaattttgggacccatttatttcactacatttgtgttctttatgttcttcatt
cttttgaacatgtttttggccattatcaatgatacctactctgaagtcaaatcagatatg
gcacaacagaaggctgaaatggaactgtctgaccttatcaggaagggctacaacaaagcc
atgatcaaacttaaattgaagaaaactactgttgatgacatttcagaaagtctgagacaa
ggtggaggaaaactcaattttgatgagctccggcaggatctcaaagggaaggggcacaca
gatgcagagatcgaagcaatatttaccaaatatgaccaggatggggaccaggaattgacg
gagcatgaacatcagcagatgagagatgacctggaaaaggagagggaggatctggatctg
gagaggagctctctgccacgtcctctgagcagccgcagcttcccacggagcttggatgac
tccgaggaggatgaggatgaagacagtgggcacagctccaggaggaggggcagcagctct
agtggtgtttcctatgaagagttccaagtactcatgaggcgggtggatcgcatggagcac
tccatcggcagtattgtctccaagatcgatgccgttatcgtgaagctggaggccatggag
agggccaagctaaaaaggagagatgtgttgggaaggctgttagatggagtgacagaggat
gaaagactgggccgggataacgaaatccacagggagcaaatggagcggctggtgcgagag
gagctggagcgctgggagtcggatgacacggcctcccaaatgagccatcggctgggaacg
cccttgggactgaatggccaacctcgctccaggaactcccggccatcttcttcccagtca
gatggcattgatgtgggagcaggcaatggggggaacaacatccatgtgtag
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