Corvus cornix (hooded crow): 104697264
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Entry
104697264 CDS
T03546
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104697264 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104697264 (SMARCA5)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104697264 (SMARCA5)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104697264 (SMARCA5)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104697264 (SMARCA5)
RSF complex
104697264 (SMARCA5)
WICH complex
104697264 (SMARCA5)
B-WICH complex
104697264 (SMARCA5)
NORC complex
104697264 (SMARCA5)
BRF complex
104697264 (SMARCA5)
NuRF complex (fruit fly)
104697264 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104697264
NCBI-ProteinID:
XP_039406863
LinkDB
All DBs
Position
4:12018081..12041231
Genome browser
AA seq
1184 aa
AA seq
DB search
MESYRDDFRPLPGLSSRRGLGGVPADPRRLLPGRSACGSRGPHSAPSGGGARCSLPAVPA
ARGGKSRERGLAARLARWLAAPAGTGRAGPRSLRRPRSGNRDPQAAAASSSSSAGIPAAA
RPCPQPAGRQPEPRRSAVSSRRGSCPPGSRPPQPDEPPAPPLPPGATTGEAVGTGPPCAA
GLAGGDIKMEESFDDASLAKQKEIQETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPA
AQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFE
ESPSYVKWGKLRDYQIRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP
GPHMVLVPKSTLQNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEM
LIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWA
LLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKE
VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG
PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL
DGQTPHNERQASINAFNDPDSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQA
MDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDE
MLQMIRHGATHVFASKDSEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTES
SVYNFEGEDYREKQKLAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQP
NVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNASQAQKEEQLKIDEAEPLNDE
ELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWE
RCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTE
EEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIE
RENMELEEKEKAEKKKRGPKPSSAQKRKMDGTPDGRGRKKKLKL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggagagttacagagacgacttccgccccctgcccggcctcagcagccgccgcgggctc
ggtggggtcccggcagatcccagacggctgcttcccgggcgctccgcgtgcggatcgcgc
gggccccacagcgcccccagcggcggcggcgcacgctgctcgctccccgccgtccccgcc
gcgcgaggggggaagtctcgcgagcgcgggctcgcggcgcgacttgcgcgctggttggcg
gctcccgccgggacgggccgggccgggcctcgttccctccgccggccgcgctccgggaac
cgggatccgcaggccgccgccgcctcttcctcctcctccgccgggattccggctgccgcc
cgcccctgcccgcagcccgccggccgccagcccgagcctcggcggagcgccgtttcctcg
cggcggggatcatgtccgccgggcagccgcccgccgcagccggacgagccgcccgcgccg
ccgctgccaccgggcgccaccaccggcgaggccgtggggacggggccgccctgcgccgcc
ggcctggccgggggcgacatcaagatggaggagtcttttgatgatgcatctctggcgaaa
caaaaagaaatccaggaaacagatcctacgtatgaagagaaaatgcaaacagacagagca
aacagatttgagtatctgttgaagcagactgagctctttgctcatttcattcagcctgct
gctcagaaaactccaacttcacctttaaaaatgaaacctggacgtccacgaataaagaag
gacgagaaacagaatttactgtcagctggcgactatcggcaccgtagaacagagcaggaa
gaggacgaggagctgttaacagaaagctccaagacaacgaatgtctgcactcgatttgaa
gaatctccatcatatgtgaaatggggaaagctgcgtgattaccagatccgaggactgaac
tggctcatttctctgtatgaaaatggcatcaatggcatcctggcagatgaaatgggtctt
gggaagacactgcaaacaatttctcttcttggctacatgaaacactacagaaacattcct
ggacctcacatggtgttagttcctaagtccactctgcagaactggatgaatgagttcaag
agatgggtaccaacacttcgagcagtttgtttgatcggtgacaaagaccagagagctgcc
tttgtgagagatgtgttgttgcctggagaatgggatgtctgtgtaacatcatatgaaatg
cttatcaaagagaagtcagtattcaaaaagttcaactggagataccttgttatagatgaa
gcccacaggattaaaaatgaaaaatcaaagttatcagaaattgtgagggaattcaagact
accaaccggctgctattaactggaactccacttcagaacaacttacatgaactctgggcc
cttctaaacttccttttgccagatgtctttaactcagctgaagattttgattcatggttt
gatacaaacaactgtctaggggatcaaaaactggtggagcgccttcatatggtgctacga
ccattccttctccgtcgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaa
gttaaaatttatgtgggcctcagcaaaatgcagcgagaatggtatacccgaatcttgatg
aaggacatagatatcctgaactcggctgggaagctggacaagatgagactgttgaacatc
ctgatgcagctgcggaaatgctgcaatcacccttacctctttgatggagcagaacctggc
ccaccttacacaacagacatgcatttggtcaccaacagtggcaaaatggtagttctggac
aaattgctacctaaattgaaagaacaaggctcaagggttctaatcttcagtcagatgaca
agagtcctagatatcttggaagattactgtatgtggaggaattatgaatattgcagactg
gatggacaaactcctcacaatgaacgacaggcttccattaatgcattcaacgatcctgac
agctcaaaatttgtgttcatgttgagtacacgggcaggaggtcttggaatcaatctggct
actgctgatgttgtaattctctatgattcagactggaatccacaagtagacctccaggct
atggatcgagcacacagaattggccagaccaagactgtccgggtgttcaggtttattaca
gacaatacagtggaggaaaggatagtggagcgtgcggaaatgaaactgcgcctggattcc
atagtcatccagcaaggaagattggtggatcaaaacctgaataaacttggaaaggatgaa
atgctgcaaatgatcagacatggagcaacacatgtgtttgcctcaaaggacagtgagatt
acagatgaagatattgatcacattttggaaagaggggcaaagaagactgcggaaatgaac
gaaaaactttcaaagatgggtgaaagctcccttaggaattttactatggatactgaatct
agcgtgtataattttgaaggggaagactacagagaaaaacagaagttggcatttacagag
tggattgaaccacctaaaagagaaagaaaagccaattatgctgtggatgcttacttcaga
gaggctcttcgagtcagtgaaccaaaagcacccaaggctccacggcctccaaaacagcca
aatgtacaggacttccagttctttcctcctcgcctgtttgaactattggaaaaagagatt
ctctactacaggaaaacaattggttacaaggtacctcgtaatcctgatctcccaaatgca
tcccaagcacaaaaggaagagcagcttaagattgatgaggctgaacctcttaatgatgaa
gaactagaagaaaaagagaagcttctaacccagggcttcactaactggaataagagagat
ttcaaccagttcatcaaagccaatgagaagtggggccgtgatgacattgaaaatatagca
cgagaagttgaaggaaaaaccccagaggaagtaattgagtattcagctgtgttctgggaa
agatgcaatgaactccaagacatagagaaaatcatggctcagattgaaagaggagaagcc
agaattcagagacgaatcagcataaaaaaggctcttgatacgaagattgggagatataaa
gcccctttccaccaactaagaatatcctatggtactaataaagggaagaattacactgaa
gaggaggatcgctttctaatctgtatgcttcacaaactaggatttgataaagaaaatgtc
tatgatgaattaagacaatgtatccgaaactcgccgcaattcagatttgattggtttctc
aagtccagaactgcaatggagctgcaaaggaggtgtaatactttaatcactctcattgaa
agagaaaacatggaactggaagaaaaggaaaaggcagaaaagaagaaacgtggaccaaaa
ccatcttcagcacagaagcgcaaaatggatggtactcctgatgggcgtgggagaaaaaag
aaactaaagctgtga
DBGET
integrated database retrieval system
