Corvus cornix (hooded crow): 104697370
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Entry
104697370 CDS
T03546
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104697370 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104697370 (HNRNPM)
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
hnRNP proteins
104697370 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
MARF1_RRM1
RRM_3
RRM_5
RRM_occluded
PhageMin_Tail
Collagen_mid
Motif
Other DBs
NCBI-GeneID:
104697370
NCBI-ProteinID:
XP_039422119
LinkDB
All DBs
Position
28:complement(4413797..4432618)
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AA seq
651 aa
AA seq
DB search
MKRGGNRFEPYANPAKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRG
CAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEDPDGEHARRAMQKVMAAGGMGIGPGPG
GPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVR
ADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPE
RPQQLPRMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREF
GRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPAGMGHGMERVGSE
IDRMGLVLDRMGSNVERMGSGMERMAPLGIDHLAPNLERMGPAMERMGSGIERMGSGIGF
GIERMGAAIDRVGTAMDRMGSGVERMGAGMDRMGIGIERMVPAGMGAGMGQVIERMPAGL
ERIGAPPMDRLGIERMGAAPMDRMGLERIGAANMERMGPPMGQGMGAGIERMGLAMGSNF
ERPMDMERGNFAGNFAGSLGGAGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHV
LYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggggagggaaccgcttcgagccctacgccaaccccgccaagaggtaccgcgcc
ttcatcaccaacatccccttcgacgtcaagtggcagtcgctgaaggacctggtcaaagag
aaagttggtgaggtaacatacgtggagctcttaatggacgctgaaggaaagtcaagggga
tgcgcggtggttgagttcaagatggaagagagcatgaaaaaggctgccgaggttttgaac
aagcacagtcttggtgggagacccctgaaagtgaaagaagaccccgatggagagcacgcc
aggagggccatgcagaaggtgatggcagcaggagggatgggcatcgggcccggccccggc
ggccccggcatgatcaacatcccccccagcatcctgaacaaccccaacatccccaacgag
atcatccacgccctgcaggccggcaggctcggcagcaccgtcttcgtggccaatctggac
tacaaggtgggctggaagaagctgaaggaggtgttcagcatggctggagtggtggttcgg
gccgacatcctggaggacaaggacggcaaaagccgcgggatcggcaccgtcacctttgag
caggccatcgaggccgtgcaggccatctcgatgttcaatgggcagctgctctttgacaga
cccatgcacgtcaaaatggatgaacgagcctttcccaaaggagatttcttccctccagag
cgaccccaacagctccctcgaatgggaatggaaggcatgggctttggaatgaataaaatg
ggaggaatggaaggtcccttcggtggcatggaaaacatcggtcgcttcccagctgggatg
aacatgggcaggatgagtgagatggatcgggccatgggagggggatttgagagggagttt
ggaagaaatgagatgggaatgtcccggagttttggagagaccttggagaggggaataggt
ggtggaaacgccagcattcccggcatcgagaggatggcccctggcatcgatcgcatgggc
tcgggaatcgagcggatccccgcggggatggggcacgggatggagagggtgggctcggag
atagacaggatggggctggtgctggaccgcatgggctccaacgtggagcggatgggctcg
ggcatggagcgcatggccccgctgggcatcgaccacctggcccccaacctggagcgcatg
gggccggccatggagcgcatgggctccggcatcgagcgcatgggctccggcatcggcttc
ggcatcgagcgcatgggcgccgccatcgaccgcgtgggcaccgccatggacaggatgggc
tccggcgtggagcgcatgggggcgggcatggataggatgggcatcggcatcgagcgcatg
gtgcccgccgggatgggcgcgggcatgggccaggtgatagagaggatgcccgcggggctg
gagcgcatcggggccccgcccatggacaggctcgggatagagaggatgggcgccgcgccc
atggacaggatgggcctggagcgcatcggggccgccaacatggagaggatggggccgccc
atggggcagggcatgggggcagggatcgagcgcatggggctggccatgggcagcaacttc
gagaggcctatggacatggagcggggcaactttgcagggaattttgcagggtccctggga
ggagccggaggccctgcagccggggtggcccggaaagcctgtcagatatttgtgagaaat
ctgccttttgattttacatggaaaatgctgaaagataaattcaatgaatgtgggcatgtg
ctctacgctgacatcaagatggagaacggcaagtccaagggctgcggggtggtgaggttc
gagtcccccgaggtggcggagcgcgcgtgccgcatgatgaacggcatccagctgcggggc
cgcgagatcgacgtgcggatcgaccgcaacgcgtag
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