KEGG   Corvus cornix (hooded crow): 104697382
Entry
104697382         CDS       T03546                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104697382 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    104697382 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccw03021]
    104697382 (ELL)
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104697382 (ELL)
Transcription machinery [BR:ccw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104697382 (ELL)
    Little elongation complex (LEC)
     104697382 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL OrgC RNA12
Other DBs
NCBI-GeneID: 104697382
NCBI-ProteinID: XP_039421923
LinkDB
Position
28:3946424..4000020
AA seq 610 aa
MAALQAERGYGLSCGRLGRGTRVSVFHVKLTESALRAFESYQACKDAVTSKPVIQFQGSQ
GHIAIPRPDRPAEVRTFTFYLSNIGKDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQVRKPAPGASDAVPSRKRPT
PVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQ
QVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILVRKLCQPQNSGGFQGEAPS
LSPPKDTVNSSSPPQKRSQPLEFIDPLANKKPRISHLAHRTQPTFNGKLNSSNGKDTPAP
PALPPALPEPVSSSSTLPALELPRPHDPLSDVSNDLTHNGRDCESTEPPDRLSHPLPTDC
AQSSKHNCGSYVKSKKKSKKHKDKEKERKEKKSEEKCKEEKQNCEVIKNADLVSVPQEQV
PGLNGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERIT
RRFTQLDAKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKK
LIAEYDQQQF
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcggcgctgcaggcggagcgcgggtacgggctgtcctgcggtcgcctcggccgcggc
acccgcgtctccgtcttccacgtcaagctcacggagagcgccctgcgcgccttcgagagc
taccaggcctgtaaggatgctgtgacgtcaaaaccagtcatccagtttcaaggaagccaa
gggcacatcgcgatcccgaggcccgatcgaccggcggaagtgcggaccttcacgttttat
ctctccaacattggcaaggacagtccccaggggagctttgactgcatccagcagtatgta
tccagcaatggcaatatccatttggattgcctgggaagcatacaggataaaatcaccgtg
tgtgctactgatgattcctaccagaaggcgaggcagagcatggcacaggcagaggaggag
actcgcagccggagcgccatagtcattaaacctggggggagatatgtaggcaaaaaggtt
caggtgcgtaaacctgcaccaggagcttccgatgctgttccctccaggaagcgcccaacg
ccagtcaaccttgccagtgcaataaagagaggcaatagtgcgatttcccagagacccttc
aaagatagggttgtgcacttactggcactaaagccttataagaaacctgaacttattctc
agattgcagaaggatggactttctcagcaggacaaggatttgctggataaccttctgcaa
caggtggcaaatctgagtgccaaggacagcactttcacactgaaagattgtgtatacaaa
gaagtgcagaaggactggcctggctactcagaaggagatcagcagttgttgaagaggatc
ctcgttaggaagctctgccagccccagaacagcggcggtttccagggagaagcgccttcc
ctgagccctccgaaggacaccgtcaactccagctctccccctcagaaacgatcccaacct
ctggagttcatcgaccccctggccaacaaaaagcccaggatctcgcatttggctcacaga
acccaacccactttcaacgggaagctgaattcctccaacgggaaggacaccccggccccc
cctgccctgcccccggccctgccggagccggtgagctccagctccaccctcccggcgctg
gagctgcccaggcctcacgatcccctctcggatgtcagcaacgacctgactcacaacggc
agagactgtgagagcacggagcctcccgacagactgagtcaccccctgcccacagactgt
gcccagagcagcaaacacaactgcggctcctacgtcaaatccaagaaaaaatccaaaaag
cacaaagacaaggagaaggagaggaaggagaagaaaagcgaggagaagtgcaaagaggag
aagcagaactgtgaagtaataaaaaatgctgacttagttagtgttccccaggaacaggtc
ccaggtttaaatggaacatgcaataattctagtgtaccaacatcaacttcagaaatgcca
gattatttattaaaatacgcagccatttcctcctcggagcagcgtcagagctacaagaac
gacttcaacgcggaatacaacgagtacagggacttgcacgcccggatagagcggataacc
cgacggttcacccagctggacgccaagctgaagcaacttttgcagggctctgaggaatat
aagaccatccacgatcaaattttacaggaatatcggaaaattaaaaagacaaaccccaac
tacagccaagagaagaaccgctgcgaatacctccacaacaaactggcccacatcaaaaaa
ctgatagcagagtatgaccagcagcagttttag

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