Corvus cornix (hooded crow): 104697406
Help
Entry
104697406 CDS
T03546
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104697406 (HDGFL2)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104697406 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
104697406
NCBI-ProteinID:
XP_039422300
LinkDB
All DBs
Position
28:4501645..4510747
Genome browser
AA seq
642 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDVPENDPMAGSDAGDDE
DDSAMATVPTEKVDSDEDSDRGSDHSGLKRKSLAMKMPVTKRPRKSSSDLDQGSPSVTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAAGRKKKKVESGSDSDSKVDSDLEMGNT
TVDMTKSDSDSDSDVSVKKAPRGRKPAEKPPPKPRGRKPKPERVPSSSSSDSDSDSDVDR
ISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEVHSDSDSSAE
DEMAKKGRRGRAKAPSSSDSELEQEKEVKKPAKKQPSELSRKPNQKEKRGRAEEKPRNKP
LKVERGRKKSDPIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEELGT
LQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMESIQKANKAG
PEKDKGEAEKGQEKLSGAETRNEKGEEETNADLSGPVNGESLSQKSEGTEEKDKSQGPGA
GELEASTEEPHNNSVQDYPKAGLERARGESEAVDEEEEEEES
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccacacagcttcaaacccggggacctcgtcttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgcggatggcgctgtgaaaccccccccgaacaagtac
cccatcttcttcttcggcacccacgagaccgccttcttgggccctaaagatctgttccct
tatgaaaaatataaagacaaatacggaaaaccaaacaagagaaaaggcttcaacgagggc
ttgtgggaaatccagaacaacccccacgccagttacagtgcccctgcgcccgcgagctcc
tctgacagcgacgtccccgagaacgaccccatggcggggagcgatgccggggacgacgag
gatgactctgccatggccacggtccccacggagaaggtggacagtgatgaggactcggat
cgaggcagtgaccacagcgggctcaagaggaaatccttggccatgaaaatgccagtgacg
aaacggcctcggaaatcctccagtgacctggatcagggcagcccctctgtcacagaagag
gagaactcagaaacgtcttccgagtcggaaaaaaacagtgaccaggacttcacccctgaa
aagaagccggtggcccgggctccgcggaggatgccggcagcggggaggaagaagaagaaa
gtggagtctggctctgactccgactccaaagtggactcggatctggagatgggaaacacc
accgtggacatgaccaagtcagactcggactcggactcggatgtgtcggtgaaaaaggca
ccacgaggccgcaaaccagctgagaaaccccctcccaagccccggggcaggaagccaaag
ccagagcgtgtccccagcagctccagcagtgacagtgacagcgacagcgacgtggatcgc
atcagtgagtggaagaggcgggacgaggagcggcggcgggagctggaggagaagaggaag
agggagcaggaggaggagatccgtcggctccgggagcaggagaaggaggagaaggagaag
aggaaggagaaggcagagaagggcgaggaggtgcactcggactcagacagcagcgccgag
gatgaaatggccaaaaagggccggagaggccgggccaaggccccgtcctcctcggactct
gagctggagcaggagaaggaggtaaagaagccggcaaagaaacagccctcggagttgtca
aggaaaccaaatcagaaggagaagaggggccgagcagaggagaagccacggaacaaaccc
ctgaaagtggaacgaggccggaagaaatccgacccaatccccgagaggaggatggaaaag
aaaaaggagcccacagtggaagagaaactccagaaacttcacagtgagatcaagtttgcg
ctgaaggtggataacccggacatcaagcggtgtctgaacgcactcgaggagctgggcacg
ctccaggtcacttcccacatcctccagaagcacacggatgtggtggccacgctcaagaag
atccggcgctacaaagccaacaaggacgtgatggaaaaagcggccgaagtctacacccgg
ttgaagtcgcgtgtgctgggaccaaagatggaatccatccagaaagccaacaaagccggg
cctgagaaggacaagggggaggcagagaagggccaggagaagctgtcaggagcggagaca
cggaatgagaagggggaagaggagacaaatgctgacctgtcaggtcctgtgaatggtgaa
tccctgtcccaaaagtcagagggcacagaggagaaggacaagagccaagggccgggagcc
ggggagctggaggcgtccacagaggagccccacaacaacagcgtccaggactatcccaag
gccgggctggagcgagctcgcggggagtcagaggctgtggatgaggaggaggaggaggag
gagagctga
DBGET
integrated database retrieval system
