Corvus cornix (hooded crow): 104697467
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Entry
104697467 CDS
T03546
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X2
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104697467 (ZSWIM8)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104697467 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
104697467
NCBI-ProteinID:
XP_010410666
LinkDB
All DBs
Position
6:20664209..20720852
Genome browser
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCVESACEAGRTHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELSGKRKVVSETPQRVLRRLSAEGDKAVYKTAVGKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPTVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVVKEDDDKAEGGIEEEQDVFAGIKPLEQENRMEILFACAEALYAHGY
SSEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
SAQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGAR
AASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPS
LAATAVSFPGVPVPSMTQIAVHPYPSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttccttcatctcggaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattc
gaggtggtggagaaagtttatcctccagtgcctgagcagctgcaacttcgaatcgccttc
tggagtttcccagaaaatgaggaagatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccatctgagtgccactgtggtgcccccacagatggtgcctcccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgctcacgtcgtggcgctctgcctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggttacaaagagac
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaaca
gctcagcgtttgctggacgagttattatcttctcagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacttagat
gaatctactctcagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtccgctgcgagggagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagaggcgggatagcaacgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataaccggctggtggtacagtgtgcga
acatctgcatcacacagcagtgctagtgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcctgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtcctcgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactcgttctgttgggtaaag
gccatccagcagaggagctgccggttacagtgtgtagaaagtgcctgtgaggctggtaga
acccacggccaggagcccgggggaccatgtctgcagcccggggacaggctgcggccctct
ccccaggagccagcagtgcgtccgaaagaacttagtggaaagcggaaagttgtctctgaa
acgccacagagggttctgagacggctctcagcagaaggggataaagctgtgtataagact
gcagtgggcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgcatgagcagcgaggacagctctctggagccagacttggcagagatgagcctggat
gacagcagcttggcattgggggcagaagccagcaacacctttagttttacagaaagtcca
ctgagcaggagctacagggatgcctttgaggaggatggtggggtgtacttctctgaggga
cctgagcccactgtcaggagcagttccatggccaagaaatcccccaaggatcctgtgggg
gagatgggcagtggtgatgacgacctgccttctgcagatgagaactctggtggtgtgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtgtactatctgaatccacaagaggtagtgaaggaagatgatgac
aaagctgaagggggaattgaagaggagcaggatgtatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggccctgtatgctcatggatac
agtagtgaggcttgccgcttgactgtagagcttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtatcaaccagcaag
cagacatggatggcaaccaacaccttgtctaaagctgctttcttgctgactgtgttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctctaccaaggctctggaggtgaagctggcttatcaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcgaggaaga
gctgaagaactgcgagaagggacattgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaattggaataatgaaatgcctggagacgaagagcttggttttgaggcagct
gttgctgcccttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggggatctggcactagccctgatgattacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaa
ccacagacactgagttccttctactcatccagcaagcctacagttgcaaatcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttctgtc
actcagcaagctgctgtaagcactgcagtccagagcagtcctgagaactttgtggagaag
agtgcacaggagagctctcagaggtctccctgtgagccagctgctgaggccactgttttg
aaacaagaaggaaaggtccccagtcgtctggcccttggaaaccgaggtggatacaatggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccaacactcagtcggcgtcccctacgt
gggggctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctccagc
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtat
gcactagggctgcacaacttcgtgtctcccaactggctctctcgaacttactcgtcccat
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcctccagaggtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgtaaggaacag
gacaacctgatgctggaaaaggcctgcatggccgtagaagaggcagccaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttatgaacagact
gttggtgggaccccagcccagagagaaggtgccactggctgcagcgccggtggcgcacgg
gctgcgtctgaagcagcgcgtggcttggcagacagccgggtgacctcagagccgaccacg
gtgacagtggcagctgcagtaactgctgcagcaaccgtcatgccagtgatctctgtgggg
tcaaccatgtaccagcagcacacagtggcagggccagcaatggcacatacacacacccag
ggtctccacccttacaccacccttcagactcacatcccctgtaatccccagtatattgga
cacactatccagcacatgccacgcccagctgtcttcccggtccctggctcggcgtatcca
cagggtgtccatccagcattcataggggcgcagtacccttactcagtaaccacaccgtca
ctggcagctacagcagtgtcctttcctggcgtgcccgtcccctccatgacgcagattgcg
gtgcatccctatcccagtgagacgggactgtcgctgtcttccaatgtagcgctaggcagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctca
cagcccaactcccttgttacagggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccc
tacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactacgtg
catcagttttgcgttggtgcagccaagggggtgctgagcccttttgtgctccaggagatc
atcatggaagctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcacccca
gccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcatcgg
ctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcaccatga
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integrated database retrieval system
