Corvus cornix (hooded crow): 104697533
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Entry
104697533 CDS
T03546
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104697533 (HCN4)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
104697533 (HCN4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
104697533
NCBI-ProteinID:
XP_039413844
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All DBs
Position
10:19053563..19144724
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AA seq
1215 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQIGPKASIMDEEDDSDKDTRRKSIRLKPLPSPSAGSTRALGGD
PGRGGDPGLLETEAGGKGAKTSTNGDCRRFKGSLSSLTSRHLHDAAEEKRLIGGEGEPAS
PGEDKSPPGSGELEQGLPVPPPPASPPEPQQPPPRACSSTSIKVEGAGGCDQITPDEEQR
LGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDL
TMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEII
LDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPD
DCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEE
SILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLKFEVFQPGDYIIREGT
IGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQ
HDREMAHCAHNVQAAAAAASTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFR
PPVSVLGSLGQQPSQTPRQLKRFQSLIPSAGPSAVGSPSSTPSQLHTPGAETPSSSSFHI
QQLAGFSAAAGLGQFQVGSPPGGSGQPGPSSTSSVGLSQFHNAPSGSPLGTAQPLQQQQP
QQPQQQQQQPQQQQPPPALSSSGFGHFQQATAGSPSTSLTQLSSNSPPSLLNQFQPSTRP
LQGGQSQQLSGSGTLVGMNHFQPPPSSNSPSSSLSQLAQASGGPSAALCQTHPSALGSLT
GTIAQLHQERPPFASASPLQQPGVASPCYTPSGLSPPSQSPVASRTFQCGPAGASGSQGS
LLLPQPASPPAPPLPGRSALPPGRLNQDIKLISASQPSLPQELAQTLGHHSSPHSSRESV
SSFSPFPGGGSGLLGKPCSSIPGRVTLPRQMSSGSLPHPLVFGAGAAALAAGGRKESIVL
TGDLEPVRSKLPSNL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccctccatgcgcaagaggctctacagcctgccccagcagatcgga
cccaaggcgtcgatcatggacgaggaggatgacagcgacaaggacacccgcaggaaaagc
atcaggctcaagccactgccttcgccctctgctgggagcacccgggccctcgggggagac
cccggccgagggggggaccccggcctgctggagacggaggccggcggcaagggcgccaag
accagcaccaacggggactgccgccgcttcaaagggagcctgtcctcgctcaccagcagg
cacctccacgacgcggccgaggagaagcggctcatcggcggcgagggggagccggcctct
cccggggaggacaagagcccccccggcagcggggagctggagcaggggctgcccgtgccc
ccaccgcccgcctcccccccagagccccagcagccgcccccccgggcctgctcctcgacc
tccatcaaagtggagggagctggagggtgcgaccagatcaccccagatgaggagcagagg
ctgggccaggccggcttcatgcagaggcagttcggggccatgctccagccgggggtcaac
aaattctccttgaggatgtttggcagccagaaggccgtggagagggagcaggaaagggtt
aagtctgccgggttctggatcatccatccctacagcgacttcaggttttactgggatctg
accatgctgctgctgatggtagggaacctgatcatcatccctgtgggcatcaccttcttc
aaggatgaaaacaccaccccgtggattgtcttcaacgtggtttcggacacgttcttcctc
atcgacctcgtcctcaacttccggacaggcatcgtggtggaggacaacaccgagatcatc
ctggacccgcagaggatcaagatgaagtacctgaagagctggttcgtggtggattttatc
tcctccatccccgtggactacatcttcctgatcgtggagacgcgcatcgactctgaggtg
tacaagacggcgcgggccctgcgcatcgtgcgcttcaccaagatcctgagcctgctgcgc
ctgctgcgcctctcccgcctcatccgctacatccaccagtgggaggagatcttccacatg
acctacgacctggccagcgccgtggtgaggatcgtcaacctcatcgggatgatgctgctg
ctgtgccactgggacggctgcctgcagttcctggtgcccatgctgcaggacttccccgac
gactgctgggtgtccctcaaccgcatggtgaacgactcgtgggggaagcagtactcgtac
gccctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaggcgccggtg
gggatgtcggacgtgtggctcaccatgctcagcatgatcgtgggggccacctgctacgcc
atgttcatcggccacgccaccgccctcatccagtccctggactcctcgcgccgccagtac
caggagaagtacaagcaggtggagcagtacatgtccttccacaagctgcccgccgacatg
cggcagcgcatccacgactactacgagcaccgctaccagggcaagatgtttgatgaggag
agcatcctgggggagctgagcgagcccctgcgcgaggaaatcataaacttcaactgccgc
aagctggtggcctccatgcccctgtttgccaacgcagaccccaacttcgtgacgtccatg
ctgaccaagctgaagttcgaggtgttccagcccggggactacatcatccgggagggcacc
atcggcaagaagatgtacttcatccagcacggcgtggtcagcgtgctcaccaagggcaac
aaggagaccaagctggccgacggctcctacttcggagagatctgcctgctgacccgtggc
cggcgcacggccagcgtgcgcgccgacacctactgccgcctctactccctgtccgtggac
aacttcaacgaggtgctggaggagtaccccatgatgaggagagccttcgagaccgtggct
ctggacaggctggacaggattggcaagaagaactccatcctgctgcataaagtgcagcac
gacctcaactcgggggtgttcaactaccaggagaacgagatcatccagcagatcgtgcag
cacgaccgggagatggctcactgtgcccacaacgtgcaggccgctgccgccgccgcctcc
acgcccacgccggtcatctggacgccgctgatccaggccccgctgcaggccgctgctgcc
accacgtcggtggccatcgcgctgacccaccacccgcgcctgcccacggccatcttccgg
ccgcccgtgtccgtgctgggctccctgggccagcagcccagccagacccccaggcagctg
aagaggttccagtcgctcatcccgtccgccggcccctctgccgtgggctccccgtccagc
accccgtcccagctgcacacgccgggcgcagagaccccctcgtcctcgtccttccacatc
cagcagctcgccggcttctcggccgccgccggcctgggccagttccaggtgggatcccct
ccggggggctccggccagccggggccgagcagcacctcctcggtggggctgagccagttc
cacaatgcaccctcggggtcacccctaggcacggctcagcccctgcagcagcagcagccg
cagcagccgcagcagcagcagcagcagccgcagcagcagcagccgccgccagccctctcc
agcagtggatttgggcacttccagcaagccacagccggctccccatcgacatccctcacc
cagctctcatcaaactccccccccagcctcctgaaccagttccagcccagcacgagacca
ctgcaggggggacagtcgcagcagctctcgggcagtgggaccttggtggggatgaaccac
ttccaaccccctccttcttccaactctccatcctccagcctcagccagctggcgcaggcc
tcgggcgggccgtccgcagcgctgtgccaaacacatccaagtgctttaggatctctgact
ggaacgatagcccagctccaccaagagcggcctcccttcgcttccgcgtccccgctgcag
cagcccggcgtcgcctctccctgttacaccccttctggccttagtcctcccagtcagagc
ccggtggccagcagaactttccagtgcggccccgcgggggcctcgggctcccagggctcg
ctgctgctgccgcagcccgccagccccccggccccgccgctgcccgggcgcagcgcgctg
ccgccgggccgcctcaaccaggacatcaagctgatctccgcgtcccagccctctctaccc
caggagctggctcagacgctgggccaccacagctctcctcactcctctagagaatctgtt
tccagcttctcccctttccccggcggcgggagcgggctcctggggaagccgtgcagctcc
atccccgggcgggtgactctgccgcgccagatgtcctcaggttctctgccacacccgctg
gtgttcggggccggtgccgctgccctggccgcgggcgggcggaaggaatccatcgtgctc
acgggggatctggagcccgtcaggtccaaactgccctccaatttgtga
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