Corvus cornix (hooded crow): 104697544
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Entry
104697544 CDS
T03546
Symbol
ZBTB40
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 40
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104697544 (ZBTB40)
04121 Ubiquitin system [BR:
ccw04121
]
104697544 (ZBTB40)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
104697544 (ZBTB40)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104697544 (ZBTB40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_jaz
NagA_N
zf-C2H2_ZNF462_1st
BTB_KLHL33
zf-C2H2_5
Motif
Other DBs
NCBI-GeneID:
104697544
NCBI-ProteinID:
XP_039419962
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All DBs
Position
21:complement(901522..946173)
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AA seq
1281 aa
AA seq
DB search
MSAQPVPSICSCCDLVQVGSCSEPDFIEKCSRIHPFHYLGFVKAVWRPRQEEASRCHGAS
QYSWKLLPQLYALCNCTIFIGNMHFRAHEVVLAAASLLFKSLLDSTDTISIDASVVTPEA
FALLLQMMYNGRLPLGKHSFTEVISMADSLQMFDVAVSRKNLLRDLMSCSAQDQVVRGVS
SQEADSSGNQAEANYLPQSGRPDQEKTFVILTQRVSPLPGPVEAEMEAGVSPSGQELTVN
HTXAHQDTMLSDSRSLQEDSGSGPDQPAHAEWSSCVEEELAESPEGKGRSRDLAAESKSC
KLDSFVGYESVFSEALSDAQAVLKRLEECREIDASQKEALAACLAKAEKQSVFKELLGKV
KDARSQDAHAQDSDTRDTRPLDTQTLVSFLKLFQDTNPELRVALLEREHSSREAPQXAES
TAREETLTALLLCCRGELIQSVTQLSPIIEFLEAVEEAFLTASEKQVVLDCCEGGSQREA
MDNLVRKVNEEKTLKVESLVKLLEAVKASFPGLQLLXDNLVATANISDGKAQKDYGAKLL
XQYXENFVELLTDTQVLLEDISAAWSLAPAEREMSRLLGNEAGGFASLVLAVLEWQSLSV
SAVWQLLMAVQESASLKLSMKDIQKQPSTEFFFQRVATGESTASEIILQHGKLISEDIQQ
KEDLKGLAPXEAGLREQVKELLSISAQTESSEASLKAALCTAQGKSVPAIKICHLLCSVQ
ESFPDLQPVMQELGRVGLLTEGRGEKPGIRRWTVNNESQLEALDKDEDKVGGASAKEAKE
SQDKASSKKSFVCKACDKVFHFYCCLKVHMKCCWVARGKQIQCKEHSEVKSTKKELEKHQ
LEVHGMVGMAKKKKKSIPVACDICGXEFAHASGMQYHKXTEHLDEKPFSFQEWGAKFAAN
STLKNHLRLHTGDGPFVCKHCLITFRQASALAYHTKKEACXGGVYSCQCCDTVFTQSIEL
SRHVCAHTGDKPYVCWECRKGFHQANGLSIHLQTFHTDTEDPYDCRKYQMSFATLQEHRK
HVREAHSRGYHPCPTCSKIFSAPSLLECHMVLGXSPFTGEMCNKAYQQLSGLWYHNTTHH
PDVFAAQNHQSSKFSSVQCGCCDKTFISTAAHXRHVEAEHTDVKFHECESCKELFLTLAL
LQVHMKYRHSGSQLFRCLYCSMAFRSPGVLQSHITSQHITQTDSTFTCELCGELFPSQGK
LEGHLSTEHPKVAFSQATMAQIVQVTQTLEQEAAEHIISSDDAKPMMLPKSQVSQTGSEL
VAVTMEDLSDXAVTLICEEIK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcagcctgtgcccagcatctgctcgtgttgtgatttggtacaagttgggagt
tgctctgagcctgatttcatagaaaaatgctccaggatccatccttttcattatctgggg
tttgtgaaagcagtgtggagaccaaggcaagaagaggccagtagatgccatggagcttcc
cagtacagctggaagctgctgccccagttgtacgctctctgcaactgcaccatcttcatt
gggaacatgcattttagagcacatgaggtggttttggctgctgccagcctgctgtttaaa
tccctgttggacagcacagacaccatctccatcgatgcttctgtggtgactcctgaggcg
tttgcactcttacttcagatgatgtacaatggcagactcccactggggaaacacagtttc
accgaagttatctccatggcagatagtctgcagatgtttgatgtggctgtaagtcgcaaa
aacctcctcagagatctcatgagctgttctgctcaggaccaggtagtgagaggagtctcc
agccaggaagcagattcatctggaaaccaggctgaagctaattacttgccccagtctgga
agacccgatcaagaaaaaacatttgtcatcctcactcagagagtttctcctttacctggc
cctgtagaagcagaaatggaagcaggtgtttctccttctggccaggaacttactgtgaat
catacctaggctcaccaggacacaatgttgagtgactccaggtccctccaggaggattca
ggctctggccctgatcagcctgcccacgctgagtggagtagctgtgtggaagaggagctt
gctgagtctccagaggggaaagggcgatcgagggatttagcagcagagagcaaaagctgt
aaactggattcctttgttggatatgaaagtgttttttctgaggctctttctgatgcccag
gctgtgctgaaaagactagaagaatgcagagaaattgatgcctctcaaaaggaggctctg
gctgcctgtctggccaaagcagagaaacagtcagtgttcaaggagctgctgggcaaagtg
aaggatgctaggtcccaggatgctcacgcccaggatagtgacactcgggacactcggccc
ctggacactcagacccttgtgtcttttctgaagctgtttcaagacacgaatcctgagctg
agagtggctttgctggagagggaacacagcagcagagaagccccacagtaagcagagagc
acagccagggaagagacgttgaccgctctcttgctgtgctgcaggggggagctgatccag
agtgtgacacagctgagccccatcatagagtttctggaggcagtagaagaggcattcctg
accgcctcagagaagcaggtagttttggattgctgtgaaggtggctctcagagggaagcc
atggacaatctggtcaggaaggtgaatgaagagaaaaccctgaaagtggaaagcttggtc
aaacttctggaggctgtgaaagcatccttccctggactccagcttctgtaggacaacttg
gtggcaacagcaaacatctctgatggtaaagcccaaaaggattacggagccaaactgttg
tgacaatactgagagaactttgtggagctcctgacagacacccaggtgctgctggaggac
atctctgctgcatggagcctggctcctgcagagagagagatgagcaggctccttgggaat
gaggcaggcggttttgcctcccttgtgttggcagtgctggagtggcagtccttgtctgtc
tctgctgtttggcagctgctgatggctgtgcaggaatctgcatccctgaaactgtccatg
aaggatatccagaaacaacccagcacagaatttttcttccaaagagtggccaccggtgag
agcacagccagtgagatcatcctgcagcacggcaagctgatctcagaagacatccagcag
aaagaggacctgaagggcttggctccgngagaggcagggctcagggaacaagtgaaagag
ctactgagtatttctgctcagactgaaagttcagaggcctctttgaaagcagctctctgc
acagcccaggggaagtctgtcccagccatcaagatctgccacctgctgtgcagtgtccaa
gagtccttcccagacctgcagccagtgatgcaggagctgggccgtgtgggtctgttgact
gagggaagaggggagaaacctgggatcaggaggtggacggtgaacaatgaatcccagctt
gaagctctggacaaagatgaggacaaggtgggaggtgccagtgccaaagaggcaaaggaa
tcccaagacaaagcttcttccaagaagagttttgtctgcaaagcctgtgataaggtcttc
cacttctactgctgcctgaaggtgcacatgaaatgctgttgggtggccagaggaaagcag
atccagtgtaaagagcacagcgaggtcaaatcgacaaagaaggagctggagaagcatcag
ctggaggtccatgggatggtggggatggccaagaagaagaagaagagcatccctgtggca
tgtgacatctgtggannagagtttgctcatgcctcagggatgcagtaccacaagntgaca
gaacaccttgatgagaagcccttctccttccaggagtggggggccaagttcgcggccaac
tccacgctgaagaaccacctgcggctgcacacaggggatgggccctttgtgtgcaagcac
tgcttgataaccttcaggcaggcctcggcccttgcctaccacaccaagaaagaagcatgc
tgagggggagtgtattcctgccagtgctgtgacactgtgttcacccagtccatcgagctg
tcgcgccacgtttgcgcccacaccggggacaagccctatgtctgctgggagtgcaggaaa
ggctttcaccaggccaacgggctctccatccacctccagaccttccacacagacactgaa
gatccctatgactgcaggaagtaccagatgagctttgccaccctgcaggaacaccgcaag
catgttcgtgaagcccattcccggggataccacccctgccctacctgctccaaaatcttc
agtgccccatcgctcctggagtgccacatggtgttgggtnnttcaccctttaccggtgaa
atgtgtaacaaggcttaccagcagttgtcagggttatggtatcacaacacgacccaccac
cctgatgtctttgcagctcagaatcaccagtcctccaagttctcctctgtgcagtgcggc
tgctgcgacaaaaccttcatcagcactgctgctcactgaaggcatgtcgaggcagagcac
acagatgtgaagttccacgagtgtgagtcgtgcaaggagctgttcctcacgctggctctc
ctgcaggttcacatgaagtacaggcactcaggttctcagctgttccgctgcttgtactgc
tccatggccttccgctccccgggggtcttgcagagccacattaccagccagcacatcaca
cagacagacagcaccttcacctgtgagctctgtggggagctcttcccctcccagggcaag
ctggaggggcacctcagcactgagcatcccaaggtggccttctctcaagccaccatggcc
cagattgtgcaggtgactcagacattggagcaagaagcagcagagcacatcatctcttct
gatgatgccaaacctatgatgttgcccaaatcccaagtgagccaaactggctctgagctg
gtggcagtgactatggaggacttgtctgatnnggcagtcactttgatttgtgaagaaatc
aagtga
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integrated database retrieval system
