Corvus cornix (hooded crow): 104697623
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Entry
104697623 CDS
T03546
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X8
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104697623 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104697623 (KCNMA1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
104697623 (KCNMA1)
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
104697623
NCBI-ProteinID:
XP_010410886
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Position
6:complement(22785545..23224220)
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AA seq
1302 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDAQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCK
ACHDDITDPKRIKKCGCKRLIYSKMSIYKRMRLACCFDCGRSERDCSCMSGSVHSNMDTL
ERAFPLSSVSVNDCSTSLRAFEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPG
NEQIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVTSALI
GLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAV
NINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMD
RSSPDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVN
DSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGG
ATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKAL
KTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRA
SLSHSSHSSYSSSKKSSSVHSIPSTANRLNRTKTRDSRDKQNATRMNRMGQAEKKWFTDE
PDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatgcacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacagttt
tcagaaatcttgcagtttctgaatatacttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccgtgggaaaattttcaaaataatcaaccgctaacatattgggaatgt
gtttatttactgatggttactatgtccactgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagcgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggttcagtccttaatccccatgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttcaataaagaattatcatccgaagataaggattatc
actcagatgttgcagtaccacaataaggcccatctactaaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccgggcctttcaacaatgttagccaacctcttctctatgaggtcattcata
aagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatgtat
acggaatatctgtctagtgcctttgttggtttgtccttccctgcagtttgtgaactggtg
tttgcgaaactaaagctgttaatgatagccatagagtacaagtcggaaaaacgcgaaagc
agaagccgaaagcgtatattaatcaatcctggaaaccacgtcaagattcaagaaggtacc
ttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaag
gcctgtcatgatgacatcacggatcccaaaaggataaaaaaatgtggctgcaaacggctg
atctattccaagatgtccatctacaagagaatgagactggcatgttgttttgattgcgga
cgctctgagcgtgactgctcttgcatgtcaggcagtgtacatagtaacatggacaccctt
gagagagccttcccactttcttctgtctctgttaatgattgctccaccagtttacgtgcc
tttgaagatgagcagccgtcgacactatcacccaaaaaaaagcagcgaaatggaggcatg
cgaaattcacccaactcctcacccaaactgatgaggcatgaccccttgttaattcctgga
aatgagcagattgacaatatggatgccaatgtgaaaaaatatgactctacagggatgttt
cattggtgtccagccaaagacattgaaaaggtcattttgactcgaagtgaagcagcgatg
acagttttaagtgggcatgtagtcgtttgcatatttggggatgttacatctgctttgatt
ggattaagaaatttagtgatgccattacgagccagcaactttcactaccatgaactcaag
cacattgtgtttgtgggttcacttgaatacctgagaagggaatgggagacactgcataac
ttccccaaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtc
aacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgat
gcttcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagttt
gatgacagcattggggtcttgcaggctaattcccaaggctttacaccccctgggatggat
aggtcgtctccagacaacagtccagtccatggccttttacgtcaaccctccattacaaca
ggagccaacatccctattataacagagctagctaagcctggcaaacttctgcctttggtt
tcaatcagtcaggaaaaaaacagtggaacccacattctaatgataactgaactggtaaat
gattcaaatgttcagttcttggaccaagatgatgatgatgatccagacacagaactgtat
ctcacgcagccctttgcatgtggaaccgcatttgctgtcagcgtgctggactctctcatg
agcgcaacatacttcaatgacaatatcctcacactgatacggacattggtaacaggagga
gccacaccagagctggaagcactgattgctgaggaaaatgcattgagaggaggttacagc
acgccccagacacttgcaaacagggacaggtgtcgagttgctcagttggctttgtatgat
gggccatttgcagacctaggggatggaggttgttatggagatctattttgtaaagcactg
aaaacatacaatatgctttgctttggaatttatcgattaagggatgcccatctaagtact
cccagccaatgcactaaacgttatgttatcacaaacccaccatatgaatttgagcttgtg
ccgacggacttgatcttctgtttgatgcaatttgaccacaacgctggccagtcccgagcc
agtctttctcattcctcccattcctcctattcttccagcaagaagagctcatcagttcat
tctatcccatcaacagcaaaccgactgaaccgcaccaagaccagggattcccgggacaaa
cagaatgcaacaaggatgaatagaatgggccaagcagaaaagaaatggtttacagatgag
ccggataatgcctatcccagaaacattcaaatcaagcccatgagcactcacatggccaat
cagatcaatcaatataaatctacaagcagcttgataccaccaatacgagaagttgaagat
gaatgttga
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