Corvus cornix (hooded crow): 104697663
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Entry
104697663 CDS
T03546
Symbol
RAB11FIP5
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104697663 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104697663 (RAB11FIP5)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104697663 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
104697663
NCBI-ProteinID:
XP_039406660
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All DBs
Position
4:complement(72306385..72344801)
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AA seq
1254 aa
AA seq
DB search
MALLRAAALPAEGCPAWLPTHVQVTVVRARGLRCKGGGGGGKGKAGGSDAYTVIQLGREK
YSTSVAEKSGGSPEWKEECAFELPPSPGSAPGCXLTVMHRALVGMDRFLGQALVPLEPAR
QRGREPDERWHKLHSKAGKKEKERGEILVSIQFTRNNLTASMFDLSMKDKPRSPFGRLKD
KVTGKKKYDLESASAIIPSSMGALDMEDDFELGGKKSKVKGFFLKNKLRKSSLTQSNTSL
GSDSTISSASLSMAANAPEVPKSPSRHGSLSMERSVKDLLPSPKLTHKRAFSDDVSQVSP
VLEPKATQSPKPKNDPMSRSSLCINGSHVYGDEAAPRSPAGLSTSSAPLPVPGGPRRQDE
AFGFTPLHPNPQEVPWGLGSLERAQQRDEPRFIPSPPSLALQEELKVSTKAVTLSNHLGR
ARMEESSRLESKPTQAAVPLGFSAEPAKDRPPEDTRKEDKKAKGGFFHHGGTRSDAGGKG
QGDRGTPVHASAAGDERSKSSGWFGSKEPKESPQKPSFPPGPHAAAEVAGSFYSSEDCSP
CAAPRQTDPERESPAQSVGVPVPETTPPAPGELPPADADPAVPPLPSEWDDTFDAFATSR
LKPDRKKENFFASVAAEGMAFIDDPDRASPTERSAEPPCQKGSKVLEKAESPLGAEIPAA
LRSWTNFSSLDVGANLVSTTQEATVIEDVLSPVSAGSMARRRKSSTPMVWAAAFASGNPG
DKEASTALTTENSTREEGDSGEEESSSAGTNGWMTIATETAPNPSESTPSAAKERAAPEG
AFGPRPPFLGEGTFEAQSLSRAAACVLPRTSFPPELAPEALPGSTVAAVPPRVLGDVAAR
RFPEPGAEPRGGQEGAFDIRSSVFRLQASMRLEASDGLLKLSSDIRERHVVLSPWAGPQG
RQEPVPGPAVPPPKPPRWFAAAGAGGDTEEGESGDPQRGKQERWEDSEGPRAEMELQRSH
GSSEPSMPAPPSLPTPGADAAEAGSEFSASEGAGAAAVDSAARLETGASELGTGDTSVGE
HPSEMNKTDVAEQFETCTSKFSLEGLEQSGAEGSWSQPRASPQTQGATDSAKWEAASRQE
LFPEELSMSGLNPPSKLDLGQSEMFWMALEEQEAAGHPNPQSQSPHPVKPLSAGQEGSSE
RKQQHRPSLGSALSNGLERLKTVTTSSVQPVAPASHPDKTDPKLKDPALQDQSAKYYHLT
HDELIQLLLQKEGELSKKEEHIHELENYIDQLLVRIMEQSPTLLQIPLGRGQAP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgcgggcggccgcgctgcccgccgagggctgcccggcctggctgcccacg
cacgtccaggtgacggtggtgcgggctcgcgggctgcgctgcaagggcggcggcggcggc
ggcaaaggcaaagcgggcggcagcgacgcgtacaccgtgatccagctgggccgcgagaag
tacagcacctcggtggccgagaagagcggcggcagccccgagtggaaggaggaatgtgcc
ttcgagctgcccccgagcccgggctccgcgccgggctgtntgctcaccgtgatgcaccgg
gcgctcgtgggcatggaccggttcctgggccaggccctggtgccgctggagcccgcccgg
cagcgcggccgcgagcccgacgagcggtggcacaagctgcactccaaggctgggaagaag
gagaaggagcgcggtgagatcctggtgagcatccagttcacacggaacaacctcaccgcc
agcatgttcgacctgtccatgaaggacaagccgcgctcgcccttcgggaggctgaaggac
aaggtgacaggcaagaagaagtacgacctggagtcggcctctgccatcatccccagcagc
atgggagccctggacatggaggacgacttcgagctcgggggcaagaagtccaaggtcaag
ggcttcttcctgaagaacaaactgcgcaagtcgtccctgacccagtccaacacgtccctg
ggatccgacagcaccatctcctctgccagcctgagcatggcagcaaatgcccctgaggtg
cccaaatccccgagcagacacggcagtctgtccatggagcgctctgtgaaggacctcctg
ccctccccgaagctgacccacaagagagcgttcagcgacgacgtgtcccaggtcagcccg
gtgctggagcccaaagccacccagagcccgaagccaaagaacgaccccatgtcccgctcg
tccctgtgcatcaacggcagccacgtgtacggggacgaggcagccccgaggagccccgca
ggcctctccaccagctctgcccccctgcccgtgcccggcggcccccgcaggcaggacgag
gctttcggcttcacccccctgcaccccaacccccaggaggtgccctgggggctgggcagc
ctggagagggcccagcagagggacgagcccaggttcatcccgtcccctcccagcctggcc
ctgcaggaagagctcaaggtgtccaccaaggccgtgaccctcagcaaccacctgggcagg
gccaggatggaggagagcagtcgcctggagagcaaacccacccaggctgcggttcccctg
ggcttctccgcggagccagccaaggacaggccgcccgaggacaccaggaaagaggacaag
aaagccaagggaggcttcttccaccacgggggcacccggagcgacgcgggaggcaaaggc
cagggggacagagggacccccgtccacgcctcggctgcgggggatgagaggagtaagagc
agcggctggtttgggtccaaggagcccaaagagtcccctcagaaacccagtttcccgcct
gggccgcatgctgcagcagaggtcgctgggagcttttattcctctgaggattgcagtccc
tgtgccgccccaaggcagacagaccccgagagggagtctccagcccaaagtgttggtgtc
cccgtgccagaaaccactcccccagcaccgggagagctccctcctgccgacgccgacccc
gccgtccccccactgccctcggagtgggacgataccttcgatgcctttgccaccagcagg
ctcaaaccagaccggaagaaggagaacttctttgcctcggtggcagcagagggcatggct
ttcatcgacgaccccgacagagccagcccgacagagagatcggccgagccaccctgccag
aagggctccaaagtgttggaaaaggccgagtcacccctcggcgctgaaatccctgcagct
ctccgctcttggacaaatttctccagtttagatgtgggggccaacctggtgagcaccacc
caggaggccacggtgatagaggatgtgctgagccccgtgtccgcagggtccatggcgagg
aggaggaagagcagcacgcccatggtctgggcagctgcgtttgcctcgggcaaccccggg
gacaaagaggcgtcaacagcactgaccactgaaaatagcactagggaggaaggggacagt
ggtgaggaggagtcctccagtgcagggacaaacggctggatgaccatagccacggagacc
gctcccaacccctccgagagcaccccgagcgcagccaaggagcgcgcagctcccgagggc
gccttcggcccgcggccgcccttcctgggcgagggcacctttgaagcccagagcttgtcc
cgtgctgccgcctgtgtgttacccaggacctccttcccccccgagctggcccccgaggcc
ctgcctggcagcaccgtggcggccgtgcccccgcgggtgctcggggacgtggcagcacga
aggttccccgagccgggcgcggagcccaggggcggccaggagggcgccttcgacatccgg
agctcggtgttccggctccaggccagcatgcggctggaggccagcgacggcctcctgaag
ctcagctctgacatccgcgagaggcacgtggtgctgtccccgtgggcagggccccagggc
cgccaggagccggtgcccggcccggcggtgccaccacccaaaccccccaggtggttcgca
gccgctggcgctggtggggacactgaggagggggagtctggtgacccccagcgaggcaaa
caggagcgatgggaagactctgagggcccaagagcagagatggaattgcagaggagccat
gggagcagcgagccctccatgccagcgcctcccagcctgcccacaccgggagcagacgcc
gctgaagccgggagcgagttctcagcgtccgagggtgccggagctgccgctgtggactca
gcagctcgtttggagacaggagccagcgagctggggacaggggacacctctgtgggggag
cacccgtcggagatgaacaagacagatgtggccgagcagttcgagacttgcacgtccaag
ttctccctggaggggctggagcagtcgggtgctgaggggagctggagccagccccgcgca
tcccctcagacacagggggccacagacagtgccaagtgggaggcagcctccagacaggag
ctgttccctgaggagctcagtatgtcaggactaaacccaccttccaagctagacctgggc
cagtcggaaatgttctggatggctctggaagagcaggaggcagctgggcatccaaacccg
caatcccaaagcccccaccccgtgaagcccctcagcgctgggcaggagggctccagcgag
aggaagcagcagcacaggcccagcctgggctcggcgctgagcaatggcctggagaggctg
aagacggtgaccacgagcagcgtccagcccgtggccccggcctcccaccccgacaaaacc
gaccccaagttaaaggaccccgccctgcaggaccagtcagccaagtattaccacctgacc
cacgacgagctgatccagctgctgctgcagaaggagggggagctgagcaagaaggaggag
cacatccacgaactggagaactacatcgaccagctgctggtgcgcatcatggagcagtcc
cccacgctgctgcagatcccgctggggcggggccaggccccgtga
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