Corvus cornix (hooded crow): 104697869
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Entry
104697869 CDS
T03546
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104697869 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104697869 (VTI1A)
Membrane trafficking [BR:
ccw04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
104697869 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
MMPL
MFS_2
DUF1664
Sec8_N
FapA
Fusion_gly
SKA2
Mer2
Motif
Other DBs
NCBI-GeneID:
104697869
NCBI-ProteinID:
XP_039410012
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All DBs
Position
6:complement(8853166..9112057)
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AA seq
224 aa
AA seq
DB search
MSSDFESYEQDFAVLTAEITGRIGKVPKLVGDEKKQMVANVEKQLEEARELLEQMELEVR
EIPPQSRGMYSSRMRSYAQEMGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRVLTGMLRRIIQNRILIVVLAVVIIFTTMMAIFFSVRGR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacttcgagagctacgagcaggacttcgccgtgctcacggcagagatcacg
ggccgcatcgggaaggtgccgaaactggtaggagatgagaagaagcagatggttgcaaat
gttgagaaacagctcgaagaagcgagggaactgcttgagcagatggaacttgaagttcga
gagatcccacctcaaagccgagggatgtacagcagtcgaatgagaagctacgcccaagaa
atgggaaaacttgaagctgatttcaaaaggtcacgaatcgcctacagtgatgaggtgcgg
aatgagctcctaggggatgacgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgagcagattggacaggagatgcttgaaaacctc
agccatgacagagagaagatacagcgtgctcgggaaaggcttagagaaacagatgcaaac
ctggggaagagttccagggttttgacgggaatgttgcgaaggatcatccaaaaccggatt
ttgatcgttgttctggcagtcgtcatcatcttcaccaccatgatggctatttttttttct
gtcaggggacgctga
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