Corvus cornix (hooded crow): 104697872
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Entry
104697872 CDS
T03546
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04110
Cell cycle
ccw04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104697872 (SMC3)
04114 Oocyte meiosis
104697872 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104697872 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccw00535
]
104697872 (SMC3)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104697872 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104697872 (SMC3)
Proteoglycans [BR:
ccw00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104697872 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104697872
NCBI-ProteinID:
XP_039409945
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Position
6:complement(9874788..9899083)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggttttcgaagctacagggaccaaaccattgtg
gacccattcagctccaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgtccggagcag
agactggctttgctgcatgaaggtacaggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattccgacaacaggttaccgattgataaagaggaagtctcacttcgtaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagactgaaattactgaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaggagagtatttcattaatgaaa
gaaacagagggcaagagagagaagatcaatgagttgttgaaatacattgaagagcgactg
catactctagaagaggagaaagaagaactggcacaataccagaaatgggataaaatgagg
agagcattagaatacaccatttataatcaggaacttaatgaaacccgagctaagcttgat
gagctttctgctaaacgagagacaagtggagaaaaatccaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaggagcaacttagtgctgaaagacaggagcagatcaaa
cagaggactaaattagagctgaaggctaaagatctacaggatgaattagctggcaacagt
gagcaaaggaaaagactgctaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaactggcagaaacagagccaaaatttaacagcgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaagaaagaacagatctttatgcaaaacaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagagctgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaggagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgagctacagagtgaaagaaattatctatggagagaagagaatgcagaacaa
caagctcttgctgcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggaatcgtgatgaataacttt
gaatgtgaaccagctttctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaaaatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagcaaactgagatacaatccaagattcgat
aaagcattcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtccacc
cagctggccagagctttcacaatggattgtatcactctggaaggtgatcaagtcagccat
cgaggtgctttgactggaggttattatgataccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaagaacttggtgaacttgaagcaaagctcaatgaaaactta
cgcaggaacattgaaaggattaataatgagattgatcagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaagaggcagcagtctgaaaagacatttatgcctaagcaacgtagcttg
cagagcttggaggcaagtttacatgctatggagtcaactagagaatcattaaaagcagaa
ttggggacagatttgttgtcccagctcagtcttgaagatcagaagcgtgtggatgctctt
aatgatgaaatccgacaactacagcaagaaaacaggcagcttttgaatgagaggattaaa
ttagaaggcattatcacaagagttgaaacatatctcaatgagaatctgagaaaacgctta
gaccaagtggaacaagaactgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaggatacactggcacggtca
gatgatctggataactctattgacaaaacagaagcaggaattaaggaacttcagaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaaccatgatacaaaa
gaacttgaaaaaatgacgaacaggcaaggcatgcttctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
cacgttaacaaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaagaactggacaggggttacaaatccatcatggagctgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccaaaagttagtacctggtggcaaggccacgttagtgatgaagaaagga
gatgtggagggcagccagtcccaggatgaaggtgaaggcagcactgagagcgaaagggga
tctggatctcagagcagtgttccatctgtagatcagttcactggagttggcataagggta
tcatttacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tctttagtggccctggccctaatatttgccatccagaaatgtgatccagctccgttttac
ttgtttgatgaaatcgaccaagccttggatgcccagcatagaaaagctgtctcagatatg
attatggaattagctgaacatgctcagtttattacaacaacttttaggcctgaactgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggtcagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggttaa
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