Corvus cornix (hooded crow): 104698049
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Entry
104698049 CDS
T03546
Symbol
TGIF2
Name
(RefSeq) homeobox protein TGIF2 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104698049 (TGIF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104698049 (TGIF2)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104698049 (TGIF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104698049
NCBI-ProteinID:
XP_039419659
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Position
20:915939..923144
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AA seq
401 aa
AA seq
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MRAPRRRRRPGGFGQEGPAGSSTMSDSEPGDEDGATSPDPSQCKRKRRGNLPKESVKILR
DWLYEHRFNAYPSEQEKLSLSGQTSLSVLQICNWFINARRRLLPDMLRKDGKDPNQFTIS
RRGGKAGDVAVPRGAAAGSGLLVVPPVAAAGSSKVLSVPVCPQVLCHPALAVVSAHSPEW
EKPPGPEAVPRAGAGPGGSTLTLLARAEAGSPTPGLFNTPPPTPPELFGDDFSSFQLLVE
VALQKAAELERQRQGGSCPWRRTPSPPEPPNNAGPGPAVPFPGGGPTLPASASPPSLPAA
PVSLGSQGGRGRAGPARHPPAGRCPGCRGRCPGCARDRRDRSSALAGAGTGAPLENLLIS
SSPANKAPASAVSSGRQREPVFLTLASILRTVDDELCLPNL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgcccaggcggcggcggcggcccgggggattcggccaggagggtcccgcgggc
agctccaccatgtcggacagtgagccgggggacgaggacggcgccacatcccccgacccc
tcgcagtgcaagaggaagagaaggggcaacctccccaaggagtcggtgaagatcctgcgg
gactggctgtacgagcaccgcttcaacgcctacccctcggagcaggagaagctcagcctc
tcggggcagaccagcctctccgtgctgcagatctgcaactggttcatcaacgcgcggcgg
cggctgctccccgacatgctgcgcaaggacggcaaggaccccaaccagttcaccatctcc
cgccgcgggggcaaggccggcgacgtggccgtgccgcggggcgccgccgccggctccggg
ctgctcgtggtgccgcccgtggcggccgcgggctcctccaaggtgctgtcggtgccggtg
tgcccgcaggtactgtgccacccggcgctggccgtggtgagcgcccacagccccgagtgg
gagaagccccccgggcccgaggccgtgcccagggcgggcgcggggcccggcggcagcacc
ctgaccctgctggcgcgggccgaggcgggcagccccacgcccggactcttcaacacgccg
cccccgacgccccccgagctcttcggggacgacttcagcagcttccagctgctggtggag
gtggccctgcagaaggcggccgagctggagcggcagcggcaggggggcagctgcccctgg
cgccgcacaccgagccccccggagcctccaaataacgccgggccgggtcccgcagtgccc
ttccccggggggggcccgaccctcccggcctctgcctcacccccatccctcccggcggct
ccggtctctctcggcagccaaggcggcagaggaagggccggcccggcccgccaccctcct
gccgggagatgccctggctgccgaggacgctgccccggctgtgcccgggaccgtcgtgac
cggagctcggcgctggccggagcgggcactggagctcccctggaaaacctgctgatctct
tcctctcctgcgaacaaggctccagccagcgccgtttcctcagggagacagagagaacct
gtttttttaacgctggcgtctattttaaggactgtggacgacgagctttgtctcccaaat
ctctga
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