Corvus cornix (hooded crow): 104698060
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Entry
104698060 CDS
T03546
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04136
Autophagy - other
ccw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104698060 (ATG13)
04136 Autophagy - other
104698060 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104698060 (ATG13)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104698060 (ATG13)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104698060 (ATG13)
Atg1 complex
104698060 (ATG13)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104698060 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104698060
NCBI-ProteinID:
XP_010411516
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All DBs
Position
5:39416724..39441385
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AA seq
540 aa
AA seq
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MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGVV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQPAALG
VGSADMGCPVLFAGGLNAAHPHQLIGPGKEGGVPPVPSQPAHGTQADQERMCTPLDGVHY
SAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMANLDIPFAMF
APKNVELEDNDPMVNPPESPETESPLQGSLHSEGSSGSSTGNTHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcatcatcctccccaacaggttctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtgcaa
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcattttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgtagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatgggactagccttttcacatcaacctgctgccctggga
gttggatcagctgacatggggtgtcctgtactctttgctggtggcttgaatgctgcacac
cctcaccagttgattggtccaggcaaagaaggcggagttcccccagttcctagccagcca
gcacatggcactcaagctgaccaagagaggatgtgcaccccactggatggagtccattac
tcagcagctactccttctagtagtgaggacacagaaacagtatccaacagcagcgaagga
aagtgtggctccccccatgatcttttggagaccatctttatccggaaggtgggagctttt
gtcaacaaacccattaaccaggtgaccatggccaacttagacattccttttgccatgttt
gctcccaagaatgttgagctggaagataacgaccccatggtcaatcctcctgaatcccca
gaaactgaatctcctctacaaggcagcttacactcggagggctccagtggcagcagcaca
gggaacacccatgatgactttgttatgatcgactttaaaccagcattttcaaaagatgac
attcttccaatggacctggggacattttaccgtgagtttcagaatccccctcaactcagc
agcctctcgattgacattggagcacagtccatggcagaggatttggactcattaccagag
aagctggcagtccacgagaaaaacgtcaaagaatttgatgctttcgtggaaaccttgcag
tga
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