Corvus cornix (hooded crow): 104698084
Help
Entry
104698084 CDS
T03546
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104698084 (LCMT2)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
104698084 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
104698084 (LCMT2)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104698084 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_2
Kelch_1
Glyoxal_oxid_N
Kelch_3
Motif
Other DBs
NCBI-GeneID:
104698084
NCBI-ProteinID:
XP_039410138
LinkDB
All DBs
Position
1:117920950..117939584
Genome browser
AA seq
685 aa
AA seq
DB search
MLVGSGSAVSLSRQIQGTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRRAPLIHRGYY
IRARAVDHCVQDFLLKTQSLPRTQILSLGAGFDSLYFRLKDVGLLRHTVVYEVDFPNVAC
QKATLIKRMKELSALVGDTGGEGLGAITFSGEDYKLLGVDLSELSELERTLEEAGLNNEI
PTLFIAEVVLTYMENTRSDALIQWAAEHFPQACFLVYEQVHPEDPFGCVMQQHFSQLNCA
LRSLAQYPDCEAQQRRFLGKGWTDCSVMDMNEFFTCCIPEDEQQRVQTLEPFDEYEEWHL
KCSHYFVLAASKGMEPSWTPLLPSMTVPRHAGPVGMAGSVPAAVCARLSGSPGLRRYGHH
SVLIKPGVILTTGGFGEENGQHCRMRNFHVLSKLAGYWKAVCVTQNIPDKRWGERLYHTV
SCLSDTLALVVGGRTSPSSAGLGMLWLKFPKTCNASDPDDVSVEPVSLQPAAEAAASRWR
HSTTEMTFKGEQYLFVYGGRSALEPVLGDWYFLHTPELSYTAIAVEGPVPESRHSHSACS
WEGGVLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLVPRYSHTAHVHEGKLLLV
GGVWFHASSVPGITVIDLMTGLCLDYVVNVEHLEWPLMLHNHSSVFLPNEKELLVIGGGG
NCFSFGTHLNPEPVALSLSSILISC
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcggaagcggcagcgccgtgtcattgtcccggcagatccagggcaccggcggc
agcagcgccgtcagcaagtgctcggcggcagcgcggggctacatccaggaccggttcctg
cggcttctggcggggcggcggcggcggcggcgagcgccgcttatccaccggggttattac
atccgtgcccgtgctgtagatcactgtgttcaggacttcctgctgaagacacaaagccta
cccaggacacagatcctatctttaggtgctggttttgattccttatacttccgtttgaag
gatgtgggtcttctgcgccacactgtggtatatgaggtagacttcccaaatgtggcatgc
caaaaagccactctgatcaaaagaatgaaagagttgtcagcactggtgggagacactgga
ggggaaggattaggagccattaccttttctggagaggattataaattactgggagtggat
ttatcagagctgtctgagctggagagaaccctggaggaagcgggactgaacaatgaaatc
cctaccctcttcatcgcagaggtggtgctcacctacatggagaacaccaggtcagatgcc
ttgattcagtgggcagcagagcatttccctcaggcatgcttcctggtgtatgagcaggtg
cacccagaggacccttttggatgtgtcatgcagcagcatttcagccagctgaactgtgcg
ctgcgctccctggcacagtaccctgactgtgaggcacagcagaggcgctttctgggaaag
ggctggactgactgcagtgtcatggatatgaatgagtttttcacctgttgtattccagaa
gatgagcagcaaagagtgcagactctggagccttttgatgagtatgaggaatggcatctg
aaatgttctcattactttgtgttggctgcatcaaaggggatggaaccttcctggactccg
ttgttacccagtatgacagttcctcgtcatgctggtcctgttgggatggctgggagtgtc
cctgcagcagtatgtgcaaggctctcaggaagtcctggcctgagacgttacggtcaccac
tccgttcttataaaacccggcgtgattcttaccacgggaggctttggggaggagaatgga
caacactgccgcatgagaaatttccatgtgctgagtaagcttgcaggctactggaaagct
gtctgtgtgacacagaatattcctgataaaagatggggtgagaggttgtaccatactgtg
tcttgtctctcagacactctggccctggtcgtaggaggacgaacatccccatcgagcgca
ggcttgggaatgttgtggctaaagttccccaaaacttgtaatgcttcagacccagatgac
gtttcagtggagcctgtaagtctgcagcctgctgctgaagcagcagcttcacgttggaga
cacagcacaactgaaatgacatttaaaggtgagcagtacctgtttgtgtatggtggccgc
tctgctctggagcctgtgctcggggattggtatttcctgcacactccagaactctcctac
actgcgattgctgttgagggtccagtcccagaaagccgccactctcacagtgcctgcagc
tgggaaggaggagtgctgatcgcaggaggtctgggagcagctgagcagcccttgggttca
gttttccttctgagggagcttgaacatggctttcagtggcagacaatagagacacaccct
cctcttgtcccaaggtactcacatactgcacatgtgcatgaaggaaagcttctgctcgtt
ggtggagtatggtttcatgcatcctctgtgccaggcatcactgtcattgacttaatgact
ggtctctgcttggactatgtggttaatgtggagcatctggagtggccattaatgctacat
aatcatagcagtgtctttctgccaaatgagaaggagttgctggttattggtggtggtgga
aactgcttctcctttgggacacacttgaacccagagcctgtcgcgctgagcctcagcagc
atcctgatcagttgctga
DBGET
integrated database retrieval system
