Corvus cornix (hooded crow): 104698113
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Entry
104698113 CDS
T03546
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104698113 (RNF169)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104698113 (RNF169)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104698113 (RNF169)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104698113 (RNF169)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
104698113 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_4
Prok-RING_4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104698113
NCBI-ProteinID:
XP_039420195
LinkDB
All DBs
Position
1:763158..784371
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AA seq
671 aa
AA seq
DB search
MRGGRGRRGPSKCGKMAAAAAGAGGRAAVRGRRRRGRSAAEEEQDAVVLSVAECPVCRQA
LVEAVTPPCRHSLCLACFQRCLQGPGLCCPLCRSRLSTRARRQQAEPAATTAAGAAGGEQ
RPPDQDFIFRAPIKLSKTGELREEYESQLRKLREEKLQEEKTSEDLINKFILDDMDVGKR
KMEEQQKKDESVVLKGNQECFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNL
TTKVERSRSCNDTIQERSKSRQRSAPATKTKVLPITGASTPLLGVLSSTQNNRCLSAPDL
TAEKRLVLNAVSSLSALHRPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLS
PLIIKSTPRNLNRSLQKPTTYEASPRILKKWEQIFQERQIKKTLSKATLTSLASEPGEDT
VVPDITNSSSCTKEQPQVQDDHLPPDTTGEPRADLDFFPSVSEMKLGRGSEKSRGSQALT
TDDGADEPDVRSNVTALNTRVSEVPDLKVNTFMDKSCLSLGPKMLSRRLMGVSASLPDTS
ALGVPIKPSGKKQLKYLNNSELINVQNSTCNSVENIIGEQPPLLRRGRKRRCKTKHLEHN
GSVKRLRHVAGEVGLPPEVRDVEQKLQQEEEDRRLALHLQRIFDSENRTVDRRKVRVDRY
LLRSKSTLGAK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtgggcgtggccgccgcggcccttcaaagtgtgggaagatggcggcggcggcg
gcgggcgccggcggccgggccgcggtgcgggggcggcggcggcggggccggtccgcggcc
gaggaggagcaggacgcggtggtgctgtcggtggctgagtgcccggtgtgccggcaggcg
ctggtggaggcggtgacgccgccctgccgccactcgctctgcctcgcctgcttccagcgc
tgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgcctctccacacgggcc
cggcggcagcaggccgagcccgcagccaccacggccgccggagcagcaggcggggagcag
cggccgccggaccaagactttatattcagagcacccattaaattaagcaaaacaggggaa
cttcgagaagaatatgaaagccagctaaggaagctgagagaagagaaactacaagaagaa
aagacatccgaggatctgattaacaagttcattctagatgacatggatgtagggaaaaga
aaaatggaggaacagcagaaaaaagatgaatctgtagtgctgaaagggaaccaagagtgt
tttcctgaacgtctctcggattccgagaatgaagaaccattccagggcaagcaaacacat
cggtcagcttttgtttccaagaccagtgcctactcctttgccttcctttcagggaattta
accaccaaggtggaaaggagtcggagctgcaatgacaccattcaggagagatccaagagc
aggcagagatcagccccagccaccaaaacaaaggtgctgcccatcaccggcgcgtcgacg
ccgctgctcggggtgctgtcgtccacgcagaacaaccgctgcctgtccgccccggacctg
acggccgagaagcgcctggtcctcaacgccgtgtcctccctgtcggccctgcacaggccc
gagcgatccatcagccccgagagcaatgacagcatctcggaggagctcaaccacttcaag
cccatcgtctgctccccgtgcactcccccaaagaggcttcccgatggcagagtcctgagc
cccctcatcatcaaatccacccccagaaacctgaaccgcagcctgcagaagccaaccacc
tatgaggccagtcctagaatactgaaaaaatgggagcagatatttcaggagcgtcagatc
aaaaagactctctctaaagcgacccttacgtccttggcttcggagcctggggaagacacc
gtggttcctgacatcaccaactccagcagttgcactaaagagcagccacaagtgcaggat
gatcaccttccacctgacactacaggagagcctcgagctgacctggatttcttcccttct
gtcagtgaaatgaagctgggaagagggagtgagaagagcagaggttcacaggccttaacc
acagatgacggtgctgatgaaccagatgtgagatcaaacgtaaccgccctaaacacacga
gtgtctgaagtccctgacctaaaagtgaatacattcatggacaaatcctgtcttagtcta
ggcccaaaaatgctgagcagaagactcatgggtgtcagcgcctcactgcctgacaccagc
gcgctcggagtccccatcaagccgtcggggaaaaagcagctgaaatacctgaacaacagt
gagttgatcaacgtacagaacagcacttgcaattctgtggagaacatcatcggggagcag
cccccgctgctgcggcggggccggaagagacgctgcaaaacaaagcacttggagcacaac
ggctccgtcaaaagactgaggcacgtggcaggggaggtgggcctgcctccagaggttagg
gacgtggagcagaagctccagcaagaggaggaggacaggaggttggccctgcacctgcag
cggattttcgacagcgagaacaggacagtggataggcggaaagtccgcgtggatcggtat
ctgctgcggtccaagagcactctgggtgccaagtag
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