Corvus cornix (hooded crow): 104698394
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Entry
104698394 CDS
T03546
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104698394 (RTF1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104698394 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
104698394
NCBI-ProteinID:
XP_039408456
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All DBs
Position
5:complement(38083677..38113593)
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AA seq
670 aa
AA seq
DB search
MVKKRKGRVLIDSDTEDSGSEENLDQELLSLAKRKRSDSEEKEPPVSKPTASSDSETSDS
DDEWTVGGSKNKKKGKAGKAEKKGAMKKQMNKAASSGSSDKDSSAESSAPEEGEVSDSES
NSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKR
RFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVMSHNKERRSKRDEKLDKKSQ
AMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRSSSSDEE
EEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVY
RVAEITGVVETAKVYQLGGTRTNKGLQLRHGSDSRVFRLEFVSNQEFTESEFMKWKEAMF
SAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEK
AMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALV
AESHSMKNQQMDPFTRRQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKDMSKGQ
GKDKDVNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNL
EDYKKRRGLI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagcggaaaggccgtgtccttatcgactccgacaccgaggacagcggcagc
gaggagaacctggaccaggagctcctgtcattggccaaacggaaacgcagtgactctgaa
gaaaaggaaccacctgtgagcaaacctacagcttcttcagactctgagacatcagacagt
gatgatgagtggactgttggaggttctaaaaacaaaaaaaagggaaaagcgggtaaggca
gagaagaaaggagccatgaagaaacagatgaacaaagctgcctcttctggcagctcggat
aaagacagctcagctgagagctcagcacctgaagagggagaagtctctgactcggaaagc
aacagctcctcatctagctcagattcagattcttcatctgaagatgaggaattccatgat
ggctatggagaagacttgatgggagatgaagaagaccgagctcgactggaacaaatgacg
gaaaaggagagagagcaagaactgtttaacaggatagagaagagagaagtgctaaagaga
agatttgaaatcaagaaaaaactaaaaacagcaaaaaagaaagaaaagaaagagaaaaag
aaaaagcaagaggaagagcaggagaagaaaaaactcacacagatccaggaatcccaggtc
atgtcacataacaaagagcggagatcaaagcgggatgaaaagctggacaagaaatctcag
gcaatggaggagctaaaagcagaaagagagaaaaggaagaacagaacagctgaattgctt
gcaaaaaaacagccattaaaaactagtgaagtatactctgatgatgaagaggaggaggaa
gatgataagtctagtgagaaaagtgatcgctcatccagatcatcatcctctgatgaagag
gaagagaaagaagaaattcctcccaagtcccagccagtgtccttgcctgaagaactgaac
cgagtacggttgtcacggcacaagctggaacgctggtgtcacatgcccttctttgccaag
acagtcactggctgctttgtccgtattggcattggcaatcacaacagtaaacctgtttat
cgggttgctgaaataactggtgtggtagagacggcaaaggtttaccagcttggtggcaca
cggacaaacaaaggcctacagttgaggcatggcagtgattcacgtgtgtttcgcttggag
tttgtctcaaatcaggaatttactgaaagtgaatttatgaagtggaaggaagcaatgttc
tctgctgggatgcagctacccacactagatgagattaacaagaaggaagtgtccatcaaa
gaagccctcaactacaaatttaatgatcaggacattgaagagattgtgaaagagaaggaa
aggttcagaaaagcacctccaaattatgccatgaagaaaactcagctattaaaggagaag
gctatggctgaggacttgggggaccaagataaggccaagcagattcaagatcagcttaat
gaacttgaagagagagcagaggccctggatcgtcaacgaacaaaaaatatttctgcaatc
agttacatcaaccagagaaatagagagtggaatatcgttgagtctgagaaggctcttgtg
gctgaaagtcacagcatgaagaaccaacaaatggacccctttactaggcggcagtgcaag
ccaacaatagtgtctaattccagggatcctgctgtccaagctgccatccttgcccagcta
aatgcaaaatatggatctggtgtattaccagatgctccaaaggacatgagtaagggtcaa
ggaaaagataaagatgtgaactctaaatcagctagtgacctctcagaagatcttttcaaa
gtgcatgactttgatgtaaagattgatcttcaggttcccagttcagaatctaaggcactg
gccatcacctccaaggctcctccagcaaaagatggtgcccctcggcgatcactgaacttg
gaggactacaaaaagagacgggggcttatttga
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