KEGG   Corvus cornix (hooded crow): 104698431
Entry
104698431         CDS       T03546                                 
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
  KO
K16482  centriolar protein POC1
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    104698431 (POC1B)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ccw03037]
    104698431 (POC1B)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    104698431 (POC1B)
Cilium and associated proteins [BR:ccw03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   104698431 (POC1B)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SCAP WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N eIF2A Beta-prop_DCAF4 Beta-prop_HPS5 Ge1_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 RMC1_N Beta-prop_NWD2_C Beta-prop_Nup120_160 PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 104698431
NCBI-ProteinID: XP_039426988
LinkDB
Position
1A:complement(42491125..42543382)
AA seq 439 aa
MASPLEDPVLIRSFRGHTAAVTGVAFNADTAGLATCSVDRFLMLWKLKNQRRAYRFAGHA
EAVTSVEFSPDGQVLASASQDHTVRLWIPCIHGESSVLKGHTASVRSVSFSHDGYSIVSA
SNDKSIKIWSVCYQRLLFTLFQHTRWVRCAKFSPDGRIIVSCGEDNSVNIWDTRSKTCVN
SFSDYEGYANFVAFNPSGTCIASAGSNHTVKLWDIRTNKLLQHFRVHRAGVNCISFHPSD
NYLITASSDGTLKILDLLGERLIYTLHGHQGPVLCVAFSKGGEKFASGGADAQVLLWKTN
FDTLDYKEVLKHNFRRTHIDDPPHLLDIYPRSPHLHDGKLESVEVSSKSEELQSPSAFPS
ARRSKRKAENESGSAVRSGEKHRDISSAVDSALDHIVGQLDMLTLTISLLEHRLTCTEDK
LKECIKEQQKMLLKENQNK
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggcctccccgctggaggaccccgtcctgatccggtccttccgcggccacacggcggcg
gtgacgggcgtcgccttcaacgcggacacggcggggctggctacctgctctgtggatagg
tttcttatgttgtggaagctgaagaatcagcgcagagcttacagatttgcgggccacgca
gaagcggtgaccagtgtagagttctcacccgatgggcaggtgctggcttcagcttctcaa
gatcacacagtcaggctatggattccttgcattcacggagaatcatcagtactgaaaggt
catacagcatctgttcggagtgtgagcttttcccatgatggctactctatagtttcagca
tccaatgacaagtcaataaaaatatggagtgtttgctatcagcgccttttgtttacccta
ttccaacacactcgctgggttcgctgtgccaaattttcgcctgatggaagaataatagta
tcttgtggtgaggacaactctgttaacatctgggatacaagaagtaaaacttgtgttaat
agcttctcagattatgaaggatatgcaaattttgtggctttcaacccaagtggaacatgt
atagcttctgctggttccaatcacacagtgaagctatgggatattcgaacgaacaagcta
ctgcagcatttcagagttcacagagcaggggttaattgtatatcattccatccttctgat
aactacctcatcactgcttcttctgacggtacccttaagattctggacctcttaggagaa
agacttatttacactcttcatggacaccagggacctgtactttgtgtggctttttcaaaa
ggtggtgaaaaatttgcttcaggtggagcagatgctcaggtattactatggaaaaccaac
tttgatactttggattataaagaagttctcaaacacaattttagaagaacacatattgat
gatcctcctcatctgcttgatatttacccaaggtcacctcatctccatgatggaaaactt
gagtcagttgaggttagtagcaaaagtgaagagctgcagagtccctctgcttttccctct
gcaagacgttcaaaaaggaaggcagagaacgagagcgggtcagctgtgcgtagtggggag
aagcacagagacatctcctccgccgtggacagtgctttggaccacattgtggggcagctg
gatatgttaactctaactatttcactcctagaacatcgtctgacttgtactgaagataaa
ttgaaagaatgcataaaagagcagcaaaaaatgttacttaaggaaaaccagaacaaataa

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