Corvus cornix (hooded crow): 104698445
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Entry
104698445 CDS
T03546
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw02010
ABC transporters
ccw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104698445 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104698445 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104698445 (CFTR)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
104698445 (CFTR)
Transporters [BR:
ccw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
104698445 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_21
T2SSE
RsgA_GTPase
DUF87
NTPase_1
AAA_23
MeaB
NB-ARC
Zeta_toxin
DUF4181
Motif
Other DBs
NCBI-GeneID:
104698445
NCBI-ProteinID:
XP_039426466
LinkDB
All DBs
Position
1A:complement(23745250..23805247)
Genome browser
AA seq
1084 aa
AA seq
DB search
MLQGIGELFVKANQENNNSKAPGTDSNLFFSNFPLHASPVLQDINFKIEKGQLLAVSGST
GAGKTSLLMLIMGELEPSQGKIKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYRSV
IKACQLEEDISKFPDKDYTLLGEGGIILSGGQRARISLARAVYKDADLYLLDSPFGHLDI
FTEKEIFESCVCKLMANKTRILVTSKLEHLKIADKILILHEGGCYFYGTFSELQGQRPDF
SSELMGFDSFDQFSAERRNSILTETLRRFSIEGEGMGSRNEIKKQSFKQNSDFNDKRKSS
IIINPLNANRKFSVVQKNGMQVNGIDDGHNDPPERRLSLIPDLEPGDMALLRTGMLSPDP
VLQGRRRQSVLSLMTSTSMNYGPNFSKKGSTTFRKMSMVPQTNLSSEIDIYTRRVSRDSV
LDITDEINEEDLKECFSDDAESMGTVATWNTYFRYITIHKNLIFVLILCVAVFLVEVAAS
LGGVWFLQKSALKANSTQSENSTSGNPPVIVTDTSSYYIIYIYVGVADTLLAMGIFRGLP
LVHTLITVSKTLHQKMVHAVLHAPMSTFNSWKAGGMLNRFSKDTAVLDDLLPLTVFDFIQ
LILIVIGAITVVSILEPYIFLASVPVIAAFILLRAYFLHTSQQLKQLESEARSPIFTHLV
TSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEIIFVVFFVAVAF
ISIITTGDGPGTAGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVGRIFKLIDMPTEETKS
TKPQKNNQFSDALVIENKHVKEEKHWPSGGQMIVKDLTAKYGEGGAAVLENISFSISSGQ
RVGLLGRTGSGKSTLLFAFLRLLNTEGDIQIDGVSWNTVSVQQWRKAFGVIPQKVFIFSG
TFRMNLDPYGQWNDEEIWKVAEEVGLKSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLAR
SVLSKAKILLLDEPSAHLDPVTSQVIRKTLKHAFANCTVILSEHRLEAMLECQRFLVIED
NKLRQYESIQKLLNEKSSFRQAISHAERLKLLPAHHRNSSKRKPRPQITALQEETEEEVQ
ETRL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagggaattggagagctgtttgtaaaagcaaaccaggaaaacaacaacagcaaa
gctcctggcactgacagcaatctcttcttcagtaattttccacttcatgcctctcctgtt
cttcaagatataaatttcaagattgagaaggggcagctattagctgtttctggatctact
ggagctggcaagacttctcttctgatgttgataatgggagaattggagccttcgcagggt
aaaattaaacacagtggaaggatatccttttcacctcaggtgtcctggatcatgcctgga
acaataaaagaaaacataatttttggtgtatcttatgatgaataccgctacaggagtgtc
atcaaagcctgtcaattagaagaggatatttccaagttcccagacaaagattatacactg
ctgggtgaaggtggaatcattctgagtggaggccaacgagcacgaatctcactggcaaga
gcagtgtacaaagatgctgatttgtatctcctggattctccttttggacacttagacatt
tttacagaaaaagagatatttgaaagctgtgtgtgcaagttgatggcgaataaaactagg
atcttggttacttcaaaactggaacatttaaagattgctgacaaaatattaattttacat
gaagggggttgctatttctatggaacattttctgaacttcagggtcaacggccagacttc
agctcagagctgatgggatttgattcttttgatcagttcagtgcagagagaagaaattca
atccttactgagactctccgacgattttccattgaaggagaaggcatgggatcacgaaat
gaaataaagaagcaatcttttaaacaaaactcagattttaatgacaaaaggaagagctcc
ataattattaacccccttaatgcaaacaggaagttctcagtagtgcagaagaatgggatg
caggtcaatgggatagacgatggccacaatgacccaccagagaggaggctctcgctgata
cctgacttagaaccgggggacatggctctgctgcggactggcatgctcagccctgaccct
gtgctgcaagggcggaggaggcagtcggtgttgagcctgatgacgagcacctccatgaac
tatggaccaaacttttccaaaaagggaagtacgacatttcggaaaatgtctatggtgcct
cagacaaacctgtcttctgagatagatatctacaccaggcgtgtgtctcgagacagtgtc
ttggacataactgatgaaatcaatgaagaggatttgaaggagtgcttcagtgatgatgct
gaaagcatgggtactgttgctacatggaatacctatttcagatacattactatccacaaa
aacttgatttttgttctgattttgtgtgtggctgtcttcttagttgaggtagctgcttct
cttggtggggtatggtttcttcaaaagtcagctttgaaggcaaattcaacacagtcagaa
aacagcacctctggcaaccctcctgtgattgtcactgacactagcagctactacatcatt
tacatctatgtgggagtggcagataccctgcttgccatgggaatcttcagaggtttgccc
cttgtgcatacacttataacagtgtctaaaactcttcatcaaaagatggtgcatgcagtt
cttcatgcacctatgtcaacattcaactcttggaaagcaggtggtatgcttaacaggttc
tcaaaagatacggcagtgctggatgacttacttccacttacagtatttgacttcattcag
ttaatactgattgtgattggcgctataacagtagtctcaatattagagccctacatcttc
ctggcatcagtgcctgtgatagcagcctttattctgttaagggcatacttcctccacact
tctcagcagctgaaacaactggaatctgaagctcggagtccaattttcacccatcttgtt
acaagcttaaaagggctgtggacactgagagcttttgggcggcagccgtattttgagacc
ttatttcacaaagctctgaacctacacacggcaaactggttcctctacctgtcaacactg
cgctggttccagatgaggatagaaattatctttgttgtcttttttgttgccgtggcattt
atctctatcataactacaggtgatggaccaggtacagctggaattattcttactttagct
atgaacatcatgggaaccttgcagtgggcagtaaactcaagcatagatgttgatagtttg
atgcggtctgtcggacgaatatttaaactcattgacatgccaacagaagagacaaaaagc
actaagccacagaagaataatcagttttcagatgcccttgtaattgaaaacaagcatgtg
aaggaagagaagcactggccatctgggggccaaatgattgtgaaagaccttacagcaaaa
tacggtgaaggaggagctgctgtactagaaaacatttccttttcaataagttcagggcag
agggtgggccttttaggaagaacaggttcaggaaaaagcactttactttttgcgttttta
agactgctgaatacggaaggggatatccaaattgatggagtctcctggaacacggtcagc
gtgcaacaatggagaaaagcatttggagtgattcctcagaaagtgttcatattttctgga
acttttcggatgaatttggatccttatgggcagtggaatgatgaagaaatatggaaagtt
gcagaggaggttgggctgaagtctgtaatagagcaatttccaggcaagcttgattttgtt
cttgtggatggaggctgtgtcctcagtcatggccacaaacagctgatgtgcctcgcccgg
tcagttctcagcaaagctaagatcttgctgctcgatgaaccaagtgctcacctggatcct
gtaacttcccaagtgatcaggaagaccctgaagcatgcgtttgccaactgcacggtgata
ctctccgagcacaggctggaggcgatgctggagtgccagagattcttggtaatcgaggac
aataaattgcggcagtacgaatccatccagaagctgctgaacgagaagagctccttcaga
caggccatcagtcacgccgagcgccttaaactactcccagcacaccacagaaactccagc
aaacgcaaaccccgaccccaaatcactgccttgcaggaggagacggaggaagaagtgcag
gagacaaggctgtga
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