Corvus cornix (hooded crow): 104698452
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Entry
104698452 CDS
T03546
Symbol
ADAMTS20
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X1
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104698452 (ADAMTS20)
Peptidases and inhibitors [BR:
ccw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
104698452 (ADAMTS20)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
DUF3285
Motif
Other DBs
NCBI-GeneID:
104698452
NCBI-ProteinID:
XP_039427050
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All DBs
Position
1A
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AA seq
1949 aa
AA seq
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MRGARRLAGLLCPLSLLVTASWGVRFHPAQETLVKQLSSYEIITPVRVNEFGEVFPHTHH
FKRRKRSLDAPLEPAAFRTHYQLSAYGQVFQLNLSADAGFVASQYTVVHVGAPQKQSSPD
LRHCFYRGHVNSQETHMAVFSICGGLMGTFKAHDGEYILEPLMKADGGEHEDEHNKPHLI
YRHDELKKKYQKSYKPCEVSEKELKKSTLLHPAFSSLKEESSVLQKSLGLEYALNNLSIE
DRGNPHSRKKRFLSYPRYVEVMVTADTKMVRHHGQNLQHYVLTLMSIVAAIYKDSTIGNL
INIVIVKLIVIHNEQEGPAITFNAATTLRNFCLWQQAQNILDDTHPSHHDTAVLITREDI
CRAREKCDTLGLAELGTMCDPLRSCSVSEENGLSAAFTIAHELGHVFNVPHDDSFKCKES
GIKHQYHVMAPTLNYHTSPWTWSKCSQKYITEFLDTGYGECLLDKPSGGTYDLSSQLPGS
VYDVNKQCELTFGIGSQVCPYLKQCKRLWCTSTEGVHKGCRTQHMPLADGTVCGVGMHCR
HGICVSREMELRPVDGEWGPWGPYSSCSRTCGGGIKSTTRLCNRPEPRNGGKYCVGRRMK
FRSCNTDSCPKGKKDFREQQCSEFDGKHFNINGLTSAVRWLPKYSGISMKDRCKLFCRVS
GTTSYYQLKDRVADGTPCGAETNDLCVQGLCRQAGCDHVLNSKARRDKCGICGGDNSSCK
TLAGTFNSAHYGYNVVVNIPKGATNIDIRQHSYSGKPEDDNYLALSDTHGNFILNGNFVV
SMSKREINIQGAIFEYSGSNNTIERINSTDRVEEELTLQVLCVGNLYNPDVRYSFNVPIE
DGSDLFTWDPYGPWQDCSRMCQGIRRRRVTCVRESDHVVVSDQRCEFIPAVPSVFEECNT
ECELRWHSVGKSDCTSKCGPGHRSIEIHCMKYSIARGLSAPVDDKYCADQQKPPAREPCH
GDCMLRSWHYTEWSQCSRSCARGVRTREAFCMNNLGRHLPDRECQELPRVVTQTCNEFLC
PSWSVTDWSECPVTCGKGMKHRQVWCQLNDEQLRDDFCNPNDRPESVTPCELHECASWQV
GPWGSCAVTCGRGYQVRAVKCVTGMYRVILNDDRECDAATRPRDSQECELPSCPENTKLW
TTSLPLVHVGKMTQWRYGSWTPCSASCGKGDRARYVSCRDAHGEIADESLCAYLPRPAEI
SSCFSPCGEWKVGNWSPCTVTCDSGIVTRQVICVNYHQQINENYCDPEGRPPKEQECNMP
PCPPVYHHVPKIHDHPSHFPEIGYLPVHPPQDNLNQWNRPSVGGYQWRTGPWGACSSTCA
GGFHRRVVVCQDEEGRSASNCDEATKPSESRHCDSGPCPRWNFGNWGECTQTCGDGIKTR
LVICQLPTGQMLGDQNCEILDKPPNTAQCNVHSCPGDVSWHRGPWKSCSVSCGKGLKFRD
VHCINSFQAKIEEDNCKHLKKPRAYKICRAGRCPSWKASRWKECSVSCGVGIQQRDISCQ
VAGLGRVSDMMCSRDLRPASTQHCQLPACLPYQWLAREWENCSASSRRKEIYRKVKCVNE
NQLQVDESFCDPATKPPSSKTCRLSPSKYVVLTGELSQCSASCGFGYQQSITYCVGIHSV
QSQHIHGLRTVAYRECPVEPSLYIYKCNVKGCSQAATWTVGKWTKCSASCGVGMKERTVE
CMTENGLPSDLCLPHLKPDARKICHEKECEILTTCKDMQIKKGIRKDGEYLLNIKGRMIK
IYCSGMHLENPKEYLTLVKGEADNFSEVYGFRLQNPYECPFNGSRRQDCACRNDYLAAGF
TVFSKIRFDVSSMQIKTTDFLFAQTIFGRAVPFATAGDCYSAARCPQGQFSINLAGTGLR
LSSTVKWIAQGNYATADIHKSHVSQCCFPLPAPTAWTRSTSVDCSESYSDFCESKTAFKV
SDPFKSYSAMFNHTVQYLIQTRTACLPFS
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggcgaggcggctggcgggtctgctgtgccccctctccctgctcgtcaccgcg
tcgtggggagtccgcttccaccccgcacaagagaccttagtgaagcagctctcctcttat
gaaatcatcacacctgtccgagtgaatgagtttggagaagttttcccgcacacgcatcac
ttcaaaaggaggaaaaggagcttggacgcaccgctggagcccgctgctttccgaacacat
taccagctcagtgcgtacgggcaggtcttccagctcaacttgagtgctgatgcaggcttc
gttgcctctcagtacacggtggtgcacgtcggggccccgcagaagcagtcctcccctgac
ttgcgccactgtttctaccgcgggcatgtcaattcccaagagacgcacatggctgtcttc
agcatctgtggtggtttgatgggcaccttcaaggcacatgatggtgaatacattttagaa
cctctgatgaaagcggatggaggtgaacatgaagatgaacataacaaaccacatcttata
tatagacatgatgaacttaaaaaaaagtatcagaaatcctataaaccttgtgaagtttca
gagaaagagttgaagaagagcactttattacatccagccttcagcagtttaaaggaagag
agcagtgttttacagaagtctcttggtttagagtatgctttaaataacctctctatagag
gatcgtggcaatccacattccaggaaaaaacgttttctttcctatccaagatatgtagaa
gtgatggtcacagctgacaccaaaatggttcgtcaccatgggcagaatttacagcactat
gtactaacattgatgtcaatagttgcagcaatctataaagattcaactattggaaatctt
ataaatatagttattgtcaaattaattgtaattcacaatgaacaggaaggaccagctatc
acttttaatgcagctaccactcttcgtaatttttgcttatggcagcaagcacaaaacatt
ttggatgatactcacccttctcatcatgatactgctgttctcatcactagggaagatatc
tgcagagctagagagaagtgcgatactcttggtttagcagagctaggtacaatgtgtgac
ccactacgcagctgttctgtaagtgaagaaaatggattgagtgctgcttttactatagca
catgagcttggacatgtgtttaatgtgcctcatgatgatagttttaagtgtaaagaatct
ggaattaaacaccaatatcatgtgatggctccaactttaaattatcatacaagtccatgg
acctggtcaaaatgcagtcaaaaatatatcactgaatttcttgatactggttatggtgaa
tgcctcctagacaaacctagtggaggaacgtacgatctttcctctcagctgcctgggtca
gtgtatgatgtcaacaagcagtgtgagcttacgtttggtattgggtcacaagtatgccct
tacctgaaacagtgcaaacgcttatggtgcacaagtacagaaggtgttcacaagggctgt
cgtactcagcacatgcctttggctgatggaacagtttgtggtgtaggaatgcactgccgc
catggaatttgcgtgagcagagaaatggagctgcgtcctgtagatggagagtggggccca
tggggaccttatagctcgtgttcaagaacttgtggaggtggaatcaagagcaccaccagg
ctgtgtaatcgaccagagccaagaaatggaggaaagtactgtgttggccgcaggatgaaa
tttcggtcatgcaatactgattcatgtccaaaaggcaaaaaagattttcgggagcagcag
tgctctgaatttgatggcaaacactttaatatcaatggtcttacctctgctgttcgctgg
cttccaaaatacagtggtatttctatgaaagatcgctgtaaacttttttgccgagtttct
ggaacaacttcctactatcagctgaaggacagagttgctgatggtactccctgtggagca
gaaaccaatgacctttgtgttcaaggcttatgcaggcaagcaggctgtgatcatgttttg
aattcaaaggcaaggagagacaaatgtggaatctgtggtggtgataactcttcatgtaaa
acacttgcgggtactttcaacagtgctcattatggttacaatgttgtagtaaatattccc
aaaggagcaacaaatattgatattcgacagcacagctactcagggaaaccagaagatgac
aactaccttgctttatcagatacccatggaaattttatcttgaatggaaattttgttgtt
agcatgtcaaaaagagaaatcaatatacaaggagccatttttgagtacagtggttcaaac
aatacaatagaacgaattaacagcactgatagagttgaagaagaactaaccttacaggtt
ttgtgtgtagggaatttatacaaccctgatgtgcgttattcattcaatgtcccgatagaa
gatggaagtgatctgtttacatgggatccttatggaccctggcaagactgtagcaggatg
tgccaaggtattcgaagaagaagagtgacatgtgtacgtgaaagtgatcatgtggtagtg
tctgatcaaagatgtgaattcatacctgctgtaccaagtgtctttgaggagtgtaataca
gagtgtgaattaaggtggcacagtgttgggaaaagtgactgtacatcaaagtgtggccca
ggacatcggtctattgagatccactgcatgaagtactccattgcaagaggactcagtgct
ccagtggatgataagtactgtgctgatcagcagaaaccaccagccagagagccctgccat
ggtgactgtatgttaagaagttggcactacacagaatggtcacagtgttccaggagctgt
gcaagaggtgtcagaaccagagaagctttttgtatgaacaacttgggtcgtcatcttcct
gacagagaatgccaggaacttccaagagttgttacacagacttgcaatgaattcttatgt
ccaagctggtcggttactgactggagcgagtgtcctgtgacatgtggcaaaggaatgaag
catcgtcaagtctggtgccaacttaatgatgaacaactgagagatgatttctgtaaccca
aatgacagaccagaatcagtaacaccgtgtgaacttcatgaatgtgcatcttggcaagta
gggccttggggatcatgtgctgtaacatgcggacgcggataccaggtgcgtgcagtcaaa
tgcgtcactgggatgtaccgtgttattctgaacgatgacagggagtgcgatgctgccact
cgtcctagagacagtcaagaatgtgaattgccctcttgtccagaaaatacaaaattatgg
actacttcacttcctctagttcatgtggggaagatgacccaatggagatatggatcatgg
actccatgctctgcatcctgtgggaagggcgatcgtgctcgctatgtgagttgtagagat
gctcatggagaaatagcagatgaatctttgtgtgcttatttaccacgaccagctgaaatt
tcaagctgctttagcccatgtggagagtggaaagttggaaattggtccccttgcacagtt
acgtgtgatagtggaatagtgacaagacaagtcatctgtgtcaactatcatcagcaaatc
aatgagaattactgtgatcctgaaggccgacctcctaaggaacaagaatgtaacatgcca
ccatgtccaccggtttatcatcatgttccaaaaatacatgaccatccaagccattttcca
gaaataggttacctccccgtgcaccctccacaagacaatttaaaccagtggaaccgtcct
tctgtgggaggatatcagtggagaactggaccctggggagcatgctctagtacttgtgca
ggtggatttcaccgccgagttgtagtatgtcaagatgaggaaggaagaagtgccagtaat
tgtgatgaggcaacaaaaccttcagagtcgagacactgtgattctggaccctgcccacgg
tggaactttgggaactggggagaatgcactcaaacttgtggagatggaataaagacaaga
ctggtgatttgtcagcttcccactggccaaatgttgggtgatcaaaactgtgaaattcta
gacaagccacctaacacggcacaatgtaatgtgcactcttgccctggtgatgtttcttgg
catcggggaccgtggaaatcgtgttctgtttcctgtggaaaaggtttgaagtttcgtgat
gtgcattgtattaacagcttccaagcaaaaatagaagaagataactgcaaacatttgaaa
aaaccacgagcatacaaaatatgtagagctggaagatgtccttcttggaaggccagcaga
tggaaagagtgttctgtatcctgtggagtggggattcagcaaagggacatctcctgtcag
gtggcaggcctggggcgagtgagtgacatgatgtgcagccgtgacctgcgccccgctagc
acacagcactgccagctgcccgcctgcctcccgtaccagtggctggcacgtgagtgggaa
aattgctcagcatcatctagaagaaaggaaatataccggaaagttaaatgtgtgaatgaa
aaccagctccaagtggatgaaagcttctgtgatcctgccacaaagcctccatcatccaaa
acctgcaggctatctccctctaaatatgttgtgctcacaggagagctgtcacagtgctca
gcaagctgtgggtttggttaccagcagagcatcacgtactgtgttggaatccattctgtt
caaagtcagcacatccacggccttcggactgtagcgtaccgagaatgcccggtagagcca
tccttgtacatttataaatgtaatgtcaaaggatgttcacaagcagccacatggacagta
gggaagtggaccaaatgctcagcatcttgtggagtgggaatgaaggagagaacagtagag
tgtatgactgagaatggcttacccagtgacttgtgcctgccacatttaaaaccagatgcc
agaaagatctgccacgagaaagaatgtgaaattcttaccacctgcaaagatatgcagatt
aaaaaagggattagaaaggatggtgaatacctgctgaacattaagggaaggatgataaag
atttattgctcaggcatgcacttagagaatcccaaggaatatttgacattggtaaaaggt
gaagccgacaacttttctgaagtatatggattcagattgcagaatccatatgaatgtcct
ttcaatggaagcagaaggcaagactgtgcctgtcgaaatgattaccttgcagctggcttc
acagtttttagtaaaataagatttgatgtgtcttccatgcaaatcaaaaccacagatttt
ctttttgctcagactatttttgggagagcagtaccatttgctacagctggagattgctac
agtgcagccagatgtccacagggacagttcagcattaacttggctggtacaggtctgaga
ttatccagtacagtgaagtggattgctcagggcaactatgcgactgctgacatacacaaa
tcccacgtgagtcaatgctgttttcctttacctgctcctacagcttggacaagaagtaca
agcgttgactgtagtgaaagctacagtgatttttgtgaatcaaaaacagcattcaaggtc
tctgacccatttaagtcttattcagctatgtttaatcacactgtccagtatctaattcag
accagaactgcctgcctacccttctcttaa
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