Corvus cornix (hooded crow): 109143188
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Entry
109143188 CDS
T03546
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109143188 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
109143188 (CNGA1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109143188 (CNGA1)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
SlyX
Motif
Other DBs
NCBI-GeneID:
109143188
NCBI-ProteinID:
XP_019142493
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All DBs
Position
4:47118141..47123605
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AA seq
570 aa
AA seq
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MLHSSKIDMCILSLSLNLFFSPCLPLRKKKDIFTIDPAGNIYYNWLFCITMPVMYNWTMI
IARACFDELQHDYLMAWFIIDYVSDAIYVADMFVRTRTGYLEQGLLVKEEQKLREKYKKS
FQFKLDFLSIVPTDLLYFKLGLNYPELRINRLLRVARMFEFFQRTETRTNYPNIFRISNL
VMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLTRKYVYSLYWSTLTLTTI
GETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAARAEFQARIDAIKQYMHF
RNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAINVHLETLKKVRIFADC
EAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSY
FGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQIL
MKDGLLDIEIANLGSDPKDLEEKVAYMERAMDRLQTKFARLLAEYEGAQQKLKKRLTQIE
KILKPVIEEEFADLEEADPSTDKPGLSKAE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattcctcaaaaattgatatgtgtattttaagtctctcattaaatctctttttt
tccccctgcttaccacttaggaagaagaaagatattttcaccattgatccagcaggaaat
atatattacaactggttgttttgcatcacaatgcctgtcatgtacaactggaccatgatt
attgctagagcctgttttgatgagcttcagcatgattacttaatggcatggtttattatt
gattatgtttctgatgccatttatgttgctgatatgtttgtacggacaaggacaggttac
ctggagcaaggtcttctggtgaaagaagaacaaaagctacgagagaaatacaagaaatct
tttcaattcaaactagattttctgtcaatcgtaccaactgatctcttatactttaagtta
ggattgaattacccagaattaagaataaacagactactcagagtagctcggatgtttgaa
ttcttccagagaacagaaaccaggacaaactacccaaatatcttcaggatctctaacctt
gtcatgtacattgtgattattattcactggaatgcctgtgtgtattactcgatctcaaaa
gccattggatttggggctgacacatgggtctaccccaacacctcagatcctgaatttgcc
cgcctgactagaaaatatgtctacagtctctactggtcaacactgaccctgactactatt
ggtgaaacaccccctcctgtaagagattctgagtatttctttgtggttgttgacttcttg
gttggagtgctgatttttgctaccattgttggtaacgtgggctctatgatctccaacatg
aatgctgccagggcagagtttcaagcaaggattgatgctatcaagcagtacatgcacttt
cggaatgtgagtaaagacatggaaaaaagagttataaagtggtttgactacctgtggaca
aacaaaaaggctgtggatgaaagggaagtcttgaagtatctgccagataaactaagagca
gagattgcaatcaatgttcacctggaaacgctaaaaaaggttcggatttttgcagactgt
gaagctggtctgctggttgaactggttttgaaactccagccccaggtatacagtcctgga
gattatatttgcagaaaaggagatattggacgagagatgtacattatcaaagaaggcaag
ctggcagtagttgctgatgatggaatcacccaatttgtggttctaagtgatggcagctac
tttggagaaatcagcattctcaatatcaagggtagcaaagctggcaatcgaagaacagcc
aatattaaaagtattggatactcggacttgttttgtctgtccaaagacgatctcatggag
gctttaacagagtatccagatgcaaaggcaatgctggaagaaaaaggcaagcaaatccta
atgaaagatggcttgctggacattgaaattgcaaatttaggaagtgatcctaaagatctg
gaagagaaggtcgcctacatggaacgtgctatggacaggttacaaacaaagtttgccagg
ttgttggctgagtatgaaggtgcacaacagaaactgaaaaaaagacttacacaaatagag
aaaatattgaagccagttatagaggaagagtttgcagacttagaagaagcagatccatcc
acagataaacctggattgtcaaaagcagaataa
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