Corvus cornix (hooded crow): 109146069
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Entry
109146069 CDS
T03546
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03015
mRNA surveillance pathway
ccw05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109146069 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109146069 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
109146069 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
ccw03019
]
109146069 (CPSF4L)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109146069 (CPSF4L)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109146069 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
109146069
NCBI-ProteinID:
XP_039418093
LinkDB
All DBs
Position
18:complement(11283322..11285944)
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AA seq
314 aa
AA seq
DB search
MMQELVAGVERIRFDSEADVEQQRGARPLPFPGVDSKLGTALRGLLGFFSCCPRTTPGWF
LSWLRALSPQGCSRRSCRGGCQGPPCPRGASSGGGSSLPPGLWVQWGQAGCDRAVPGVQG
RPRHGGAKPAVCKHWLRGLCKRGDGCDFLHDYDATRMPECYFYSKFGECSNQDCPFLHAG
ATASAVGCPWYDRGFCRHGPLCKYKHTRRVMCANYLVGFCPEGPKCKFVHLKAGLMVSST
DPSKEAGCPWGLVQRDLAAAEERGGEDVPPKEPPPHVTQHLAAHLWDTSGCPPSPQSPLE
GGTCSKRGSASPCR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagctggtggctggtgtggagaggatcaggtttgactcggaggctgacgtg
gagcagcagcgaggagctcggcccctgcccttcccgggggtggacagtaagctggggaca
gcgttgcgggggcttttggggttcttctcttgctgccctcgcacaacacccgggtggttt
ttgtcctggctccgggcgttgtcccctcaggggtgcagccggcgaagctgtcgggggggc
tgccagggtcccccgtgtccccgtggtgccagcagcggcggtggcagctctctgcccccc
gggctgtgggtgcagtggggacaggctggctgtgacagggctgtcccaggcgtgcagggc
cgcccccggcacggcggggccaagcccgcggtgtgcaagcattggctgcgagggctctgc
aagaggggcgacggctgcgacttcctgcacgactacgacgccaccaggatgcccgagtgc
tatttctactccaagttcggtgagtgcagcaaccaggactgtcccttcctgcacgccggt
gccaccgccagcgccgtgggctgtccctggtacgaccgtggcttctgcaggcacggtccc
ctgtgcaagtacaagcacacgaggagggtgatgtgtgccaactacctggtgggcttctgc
ccggagggacccaagtgcaaattcgtgcacctcaaggccgggctgatggtgagcagcaca
gacccgtccaaggaagctggatgtccatgggggctggtacagcgggatctggctgctgca
gaggagaggggaggtgaggacgtgccacccaaggagccacctccacatgtcacccagcac
ctggcagctcatctgtgggacaccagtgggtgtcccccgagcccgcagagcccgctggaa
ggaggcacctgctccaagagaggatcagccagtccgtgccggtga
DBGET
integrated database retrieval system
