Corvus cornix (hooded crow): 120409746
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Entry
120409746 CDS
T03546
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120409746 (IRX4)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120409746 (IRX4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
MCM_bind
Motif
Other DBs
NCBI-GeneID:
120409746
NCBI-ProteinID:
XP_039405716
LinkDB
All DBs
Position
2:complement(89271559..89282093)
Genome browser
AA seq
506 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMSTNSLTTCCESSSRTLAETGAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGGPYAGPQGYGNYVTYGTEAPAFYSLNSLDAKDGSGSAHAGIAPAAA
YYPYDHTLSQYQYDRYGTMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYEEEEEEEEEEGSQEEAMKSG
KAEGTLLKPEPTGKEEKELELSDLEDLDAAESESSECELRRPFPHTLPHPHPLPLPGGSH
PPRAAEPPAKMPPPAAAGEEEEEEAAAAAAERARSCLKTAAEECGPDPLGARQRGCESKM
CFQQGQQLLEAKPRIWSLAHTATSLNQAEYPSCMLKRPGGSVAAAAPAPVSVIDRHQDSP
VTNLRNWVDGVFHDPLFRHSTLNQALSNTTVSWATTKGAILETGALGRAVGNGANVLKGQ
LSNLAHHDSNKEFLAFPKSGSKMFCS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagtttggctacccttactcctctgcaccccagttcctgatgagcacc
aactccctgacaacctgctgcgagtccagcagccggactctggctgagacgggggcggcc
gcctccgcccagacccccgtgtactgcccggtgtacgagagccgcctgctcgctaccgcc
cgacacgagctcaactccgccgccgccctgggggtctacggcgggccctacgccgggccc
cagggctatggaaactacgtgacctacggtaccgaggctcccgccttctactccttgaac
agtttggatgcgaaggacgggagcggctctgcgcatgcgggcattgccccggcggctgcc
tactacccctacgatcacaccctcagccagtaccagtacgacaggtacgggacgatggac
ggcgggacgcggagaaaaaacgccacccgagagacgaccagcacgctgaaggcctggctg
caggaacatcgcaagaacccctaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgaccctcacccaggtctccacctggttcgccaacgcccgccggcggctcaag
aaggagaacaagatgacctggcccccgcggaacaagtgctctgacgagaagcggccctat
gaggaagaggaggaggaggaggaggaggagggttcgcaggaagaggcgatgaagagcggg
aaagccgagggtaccctgctaaaaccagaacccacgggcaaggaagagaaggagctggag
ctcagcgacctggaggacttggacgccgccgagtcggagagctcggagtgcgagctgagg
cggcccttcccgcacacgctcccgcatccgcacccgctcccgctcccgggcggcagccac
ccgccgcgggccgccgagccccccgccaagatgccgccgccggccgccgccggggaggag
gaggaggaggaggcggcggcggcggcggcagagcgggcgcggagctgcctgaagacggcg
gcggaggagtgcggccccgacccgctgggcgctcggcagcgcggctgcgagtccaagatg
tgcttccagcaggggcagcagctgctggaggcgaagcccaggatttggtccctggcgcac
actgccacctccctcaaccaggccgagtacccctcctgcatgctgaaacggccggggggc
tcggtcgccgccgccgctcccgccccggtcagcgtcatcgacaggcaccaggattcgccg
gtcaccaacctcaggaactgggtggacggggtgtttcacgaccccctgttcaggcacagt
actttaaaccaagccctgagcaacacaacagtttcctgggctaccaccaaaggagccatt
ctggaaacgggcgccttgggacgcgcggtggggaacggcgccaacgtgctcaaggggcag
ctctcaaacctggcccaccatgactcaaacaaagagtttctggcgtttcccaaatcagga
agcaaaatgttttgttcctaa
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