Corvus cornix (hooded crow): 120409949
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Entry
120409949 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: rho-related BTB domain-containing protein 2-like
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120409949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
120409949
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccw04031
]
120409949
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120409949
GTP-binding proteins [BR:
ccw04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
120409949
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120409949
NCBI-ProteinID:
XP_039407474
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Position
4:71398401..71403552
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AA seq
640 aa
AA seq
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MDPDVDYERPNVETIKCVVVGDNAVGKTRLICARACNATLSQYRLLATHVPTVWAIDQYR
VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSLANPNSLRHVKT
MWYPEIKHFCPRTPIVLVGCQLDLRYADLDAVNRARRPLAKPIKPSDILPPERGHEVAQE
LGVPYYETSVVAQFGVKDVFDNAIRAALVSRRHLQFWKSHLRKMQRPLLQAPFLPPKPPP
PLIQVPDAPPGLGGGPAALFQAPLCADVVFQLQGGHCVFAHRVYLATACSRFYDLFTLEG
PPETLSEGDGGTRDLSSWGRGFLSLRWELVADPVAGRERRMAVVAMDXGVRPEPLRAVLE
YLYTGKLERPHGDLRQVGAVAELLEVFDLRMMVANELNQESFMNQEITKAFHVRRANRVK
ECLAKGVFADVVFRVDDGVVPAHKPLLIAGCDWMRAMFRGGFRESYADEVSLPGTNCACL
RAVLDFLYTGVFTPTPELDAMELLILTDRLCLPRLQALTEQYAVDELLRAFMQRVEIDEQ
VIIYLEMTQFHNARQLAAWCLHYICTNYNRVCRRFPREMKFMSPENQAHFERHRWPPVWY
LKEEDLYLRSKKEREREEQLQRKQHPRSKWCFWRPSPPVS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacgtggactacgagcgccccaacgtcgagaccatcaagtgcgtcgtggtg
ggcgacaacgcggtgggcaagacgcggctgatctgcgcccgcgcctgcaacgccacgctg
agccagtaccggctgctggccacgcacgtgcccaccgtgtgggccatcgaccagtaccgc
gtctgccaggaggtgctggagcgctcccgggatgtggtggacgaggtcagcgtctccctg
cgcctctgggacaccttcggggaccaccacaaggaccggcgcttcgcctatggcaggtcg
gacgtggtggtgctctgcttctcgctggcaaaccccaactcgctgcggcacgtgaagacc
atgtggtaccccgagatcaagcacttctgcccccgcacccccatcgtgctggtgggctgc
cagctggacctgcgctacgccgacctggacgccgtcaaccgcgcgcgccggccgctggcg
aagcccatcaaaccctcggacatcctgccgccggagcgggggcacgaggtggcccaggag
ctgggggtgccgtactacgagaccagcgtggtggcccagttcggggtcaaggacgtgttc
gacaacgccatccgcgccgcgctcgtgtcccgccgccacctgcagttctggaagtcccac
ctgcgcaagatgcagcgcccgctgctgcaggcgcccttcctgccccccaagccccccccg
cccctcatccaggtgcccgacgctccccccggcctgggggggggcccggctgcgctgttc
caggccccgctctgtgccgacgtcgtcttccagctgcagggcggccactgcgtctttgcc
caccgcgtctacctggccaccgcctgctcccgtttctacgacctcttcacgctggagggg
ccacccgagaccctcagcgagggggacggggggacccgtgacctgtcatcgtggggccgc
ggcttcctgagcctgcgctgggagctggtggccgacccggtggcggggcgggagcggcgg
atggcggtggtggccatggacncgggcgtgcggccggagccgctccgcgccgtgctggaa
tatttgtacacggggaagctggagcggccccacggggacctgcgccaggtgggcgccgtg
gccgagctgctggaggtgttcgacctgcgcatgatggtggccaacgagctcaaccaggag
agcttcatgaaccaggagatcaccaaggccttccacgtgcgccgcgccaaccgcgtcaag
gagtgcctggccaagggcgtcttcgcagacgtggtgttccgtgtggacgacggggtggtg
ccggcgcacaagccgctgctcatcgccggctgcgactggatgagggccatgttccggggg
ggcttccgtgagagctacgccgatgaggtgtccctgcccggcaccaactgcgcctgcctc
cgagccgtcctcgacttcctctacacgggggtcttcacccccacgcccgagctggacgcc
atggagctgctcatcctcacggaccggctgtgcctgccgcggctgcaggcgctcaccgag
caatacgctgtggacgagctgctccgagccttcatgcagcgcgtggagatcgacgagcag
gtcatcatctacctggagatgacgcagttccacaacgcccggcaattggccgcgtggtgc
ctgcactacatctgcaccaactacaaccgcgtgtgccgccgcttcccccgagagatgaag
ttcatgtccccagagaaccaggcgcacttcgagcggcaccgctggcccccggtgtggtac
ctgaaggaggaggatctgtacctgcgctccaagaaggagcgggagcgcgaggagcagctg
cagcgcaagcagcacccccgcagcaagtggtgcttctggcggccctcgccccccgtgtcc
tga
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