Corvus cornix (hooded crow): 120409964
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Entry
120409964 CDS
T03546
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120409964 (PRDM8)
03036 Chromosome and associated proteins [BR:
ccw03036
]
120409964 (PRDM8)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120409964 (PRDM8)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120409964 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_2
Zf-C2H2_ZNF451_C
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
120409964
NCBI-ProteinID:
XP_039407550
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Position
4:complement(118316..122331)
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AA seq
610 aa
AA seq
DB search
MEDAGVQRGIWDGDAKTVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSAREREEQNLEAYIKSGQLFYRSLRRI
AKDEELLVWYGKELTELLLLGPARAPARTNGSPPFACPECSQRFQFELPFAAHLRFRCPK
RLHGPDTGPAAEAAGVKDGAGKEQEPGKFGKPGGPPHHPFPGPDGGPAASTKPSTDFHNL
ARELENSRGGRGGSPGRPAPPEAGPEAAAGKAKRRFPAEEERGPGAARGRFPAERPGLPA
APKEEPGCAPQQQYRAAGSYCGLEEGGRLFAPPSPETGESKRSAFVEVKKAARGPEPDGG
SEEGPERGSPGAGGAEPGLCPRGGAGGPLAARLDGGSPARGSAFSTVPQLGAGPGGPGGG
GAEERKSAFSQPARSFPHVPPLVLGPKLGGLGEPCPDGAAAPARLYAAEALAAKLPGGGE
AAGGGGGGGGGLPKQSPFLYTTAFWPKSSAAAAVAAAAAGPLQLQLPSALTLLPPSFTSL
CLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYALEPLVKRRREEKLKCPICNESFRERH
HLSRHMTSHN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccggcgtccagcggggaatatgggacggggatgccaagacggtccagcag
tgcttgactgacatttttaccagcgtttacaccacctgcgacatcccagaaaatgccatt
ttcggcccctgcgtcctgagccacacgtccctgtacgacagcatcgcctttatcgccctc
aagtccaccgacaagcgcaccgtcccctacatattccgggtggacacgtcggcggccaac
ggctcgtcggaggggctgatgtggctgcggctggtgcagtcggcgcgggagcgggaggag
cagaacctggaggcctacatcaagagcgggcagctcttttatcgctccctacgccgcatc
gccaaggacgaggagctgctggtgtggtacgggaaggagctcaccgagctgctgctgctc
ggcccggcccgggcccccgcccgcaccaacggctcgccgccgttcgcctgccctgagtgc
agccagcgcttccagttcgaactgcccttcgccgcacacctccggttccgctgccccaag
aggctgcacggccccgacaccggccccgccgccgaggccgccggcgtcaaggacggcgcc
ggcaaggagcaagagcccggcaagttcgggaagcccggcgggccgccgcaccaccccttc
cccgggcccgacggcggccccgccgccagcaccaagccctccacggacttccacaacctg
gcgcgggagctggagaactcccgcggcgggcgcggcgggtccccggggcggccggcgccc
cccgaggccggccctgaggcggcggccgggaaggcgaagcggcgtttccccgcggaggaa
gagcgcgggcccggcgcggcgcggggccgcttcccggccgagcggccggggctgccggcg
gcgcccaaggaggagccgggctgcgccccgcagcagcagtaccgcgccgccggctcctac
tgcgggctcgaggagggcggacgcctcttcgcgccgcccagcccggagaccggcgagtcc
aagcgcagcgccttcgtggaggtgaagaaggcggcccgcggccccgagcccgacggcggc
tccgaagagggcccagagcgcggctccccgggcgcgggcggcgcggagccggggctgtgc
ccccgcggcggtgcggggggcccgctggccgcccgcctggacggcggcagcccggcgcgg
ggcagcgccttcagcacggtgccgcagctcggggccggccccggggggcccggcggcggc
ggagccgaggagcgaaaaagcgccttctcgcagcccgcccgctccttcccgcacgttccg
ccgctggtgctgggtcccaagctgggcgggctgggcgagccctgccctgacggcgccgcc
gcccccgcccgtctgtacgccgccgaggcgctggccgccaagctgccgggcggcggggag
gcggcgggcggcggcggcggcggcggcggggggctgcccaagcagagccccttcctctac
accacggccttctggcccaagagctcggcggcggcggcggtggcggcggcggcggcgggg
ccgctgcagctgcagctgccgtcggcgctgacgctgctgccgccgtcgttcacctcgctg
tgcctgccggctcaaaactggtgcgccaagtgcaacgcgtccttccgcatgacttcggac
ctggtctaccacatgcgctcccaccacaagaaggaatacgcgctggagcccctcgtcaag
cgccgccgcgaggagaagctcaagtgccccatctgcaacgagtccttccgcgagcgccat
cacctctcccgccacatgacctcccacaactag
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