Corvus cornix (hooded crow): 120410588
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Entry
120410588 CDS
T03546
Symbol
IRX5
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120410588 (IRX5)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120410588 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120410588
NCBI-ProteinID:
XP_039414138
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Position
11:complement(10243644..10247310)
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AA seq
473 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAADPKAAPGCERLQESPVPRE
AESGLSDSDCKELAEERLDGPPVPHKAPGASPLGPCPGAAGRRRRGEEPPPYRPPSAAAG
PPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPAG
XLGGGGPSRSPPRPRSPAAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPARGP
PAAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtctgcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatttccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggttccctggggtaccac
ccgtacgcggcgcccctcggctcctacccctacggggaccccgcgtaccgcaagaacgcg
acgcgggacgccacggccactctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaatgcacggcggcggctcaagaaggagaacaaaatgacctggacc
ccacggaaccgcagcgaggatgaggaggaagaggaaaacatcgacctggagaaaaatgac
gaggacgagccacagaaactggaggagaagggggaccccgggacgccggacacaggagcg
gcggatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccgtcccccgggag
gccgagagcggcctcagcgactcggattgcaaagagctagcggaggagcggctcgacggg
ccgcccgtcccccacaaggcgcccggcgcttcgccgctgggaccgtgcccgggggccgcg
ggccgccgccggcggggagaggagcccccgccgtaccgcccgccctccgccgccgccggg
ccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtcatc
cactcgccgcagcaggcagccctcgccaagcccaagctctggtcgctggccgagatcgcc
acctcggcggacaaggctaaggaggccggcggtgaggcggcaccccccggccccgccggt
nngctgggcggcggcggcccgtcccgctcgccgccgcggccgcgctcgccggccgcgcag
tgccctttccccaacggggcggtcctgccccggccgctctactacacggctcccttctac
cccggctacacgaactacggctccttcggggccctgcacgggcaccccgcccgcggcccc
cccgccgccgcccccggcgcccacttcaatggattaaatcagactgtcctcagcagagcc
gagagcctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaa
gactcaccttacgaactgaagaaaggtatgtccaacatttaa
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