Corvus cornix (hooded crow): 120410656
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Entry
120410656 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120410656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
120410656
Spliceosome [BR:
ccw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120410656
Complex C
U4/U6.U5 tri-SnRNP related factors
120410656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120410656
NCBI-ProteinID:
XP_039414844
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All DBs
Position
1:complement(107395750..107396634)
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AA seq
293 aa
AA seq
DB search
MANHTVKDAHSIHGTNPQYLVXIIRTRIYESEYWKEECFGLTAELVVDTAMELKYVGAVY
GGNIKPTPFLCLTLKLLQIQPEKDIIMQFIKNEDFKYIRMLGGLYMRLTGTAIDCYKYLE
PLYDDYRKIKCPNRNGEFELMHVDEFIDELLHEERVCHIILPRLQKWYVLEGAEQLEPRV
SALEEDMDDVESSEEEEEEEDKKLKRIPSPDHHRRGYRDLEKLCRSPVVQYRQSRSRSPR
RHSCSRKRRRPSLCQERHHSKSPRWHQSRSRDRCQRSRSKSPAHHRSHRHIPL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccacacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtgnngatcatccgcacccgcatctacgagtccgagtactggaaggaggagtgttttggc
ctcacagctgagctggtggtggacacggccatggagctgaaatacgtgggggccgtctat
ggagggaacattaaacccacgcccttcttgtgcctgacactgaagctgctgcagatccag
cctgagaaggacatcatcatgcaattcataaagaatgaggacttcaagtacattcgaatg
cttggagggctgtacatgagattgacaggcactgccatcgactgctacaagtacctggaa
ccactgtacgatgactatcggaaaataaaatgtccgaacagaaatggggaatttgagctg
atgcatgtggacgaatttattgacgagctgctccatgaggaacgtgtatgtcatatcatc
ctgcctcgactgcagaaatggtacgttctggaaggagctgagcaactcgagcctcgtgtt
agtgctctggaagaagacatggatgatgtagaatctagtgaggaggaggaggaagaggaa
gataaaaagctgaaacgaatcccgtctcctgaccaccacagaagagggtacagagacctg
gaaaaactctgcagatctccagtagtgcagtacaggcagagccggagcaggtctccaaga
aggcacagctgctctcgaaagagaagaaggccctcactgtgccaggagaggcatcatagc
aaaagcccaagatggcaccagagcagatcccgggacaggtgccagagatcaagatctaaa
tctccagcgcatcaccgtagtcacagacacattccattgtga
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