Corvus cornix (hooded crow): 120410702
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Entry
120410702 CDS
T03546
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04510
Focal adhesion
ccw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120410702
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120410702
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
DUF1993
F5_F8_type_C
Laminin_II
Tropomyosin
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
120410702
NCBI-ProteinID:
XP_039415258
LinkDB
All DBs
Position
12:11660280..11670518
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AA seq
1762 aa
AA seq
DB search
MGVALAPDSPQGCARGSCYPATGDLLVGRAARLSATSTCGLRRPQPYCIVSHLQEEKKCF
ICDSRRPYDARTNTNSHRIENVVTSFAPRPKKAWWQSENGVEHVSIQLDLEAEFHFTHLI
MTFKTFRPAAMLVERSADFGHTWKVYRYFAYDCAASFPHVPHGPPRRIDDIVCESRYSDI
EPSTEGEVIYRVLDPAIPIRDPYSPAIQNLLRVTNLRVNLTKLHTLGDNLLDSRREIREK
YYYALYELVMRGNCFCYGHASECAPLSGAPATSDGMVHGRCVCKHHTQGLNCERCEDFYQ
DLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLC
KPFYYKDPTKDLRDPAVCRACDCDPEGSLDGGLCDSADDPARGLIAGQCRCKEHVAGPRC
DRCKPGFFGLSTNNPQGCRRCQCDPRGTVADGSRCDPVSGECFCKRLVTGHSCNQCLPEH
WGLSHDLPGCRPCDCDVGGARNNLCAMGTGQCQCRSHVIGRQCEQVEPGFYHINLDHYTY
EAEDARLHQGSVVEREPPTDRPASWTGTGFARMLEGGWVEFHVSDVPFSTEYDVVIRYEP
QHPEAWQEVGLKVLRPSPVSASSPCGNTIPADDQLSTSLPSGARYVVLSQPICLEQGISY
TLRLELGCAAARQDPTASVLIDSLVLLPRYSSLEMFIAGDPSSMERRETFERYHCAQPFH
TAGPSPVAKPCSSLLHSLSAFLHDGALPCLCDPQGSLSAECQPQGGQCQCKPNVMGRRCH
RCSPGTFGFGPGGCRPCQCSREGSVSTICDSTTGQCPCREGTHGPRCDRCQPGHWGFPVC
RPCQCNGHAENCDPRTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPCPEGPS
TPRHFAASCYQDSRSQQVVCHCSPGYTGSRCDECAPGYYGDPLQGGRCLPCQCHDNIDVT
DPEACDRRTGQCLRCLYNTAGPHCAECQPGFYGDATRHSCRRCSCNPLGTDPSTCGPQQC
HCDRHSGQCHCLPHVEGQSCDRCSPNFWNLASGQGCQPCACHPQHSLTPTCNQFTGQCSC
RPGFGGRTCTDCQEHHWGDPRQQCRACDCDPRGIASAQCHRSSGHCDCRPGISGVRCDQC
ARGFAGTFPACQPCHPCFGDWDRVVQDLATRTRALAQRASLLQHTGAAGAFEGTFRRLEE
NLATVRDVVATRNATAATAAHLTHAMEGLRRQIEEATERLTRVEGELTAAQDANFNASHV
LNTVDRGARALNHSLQYLEQQLHALKTSNFLGAYDSIRQSYGESREAEHQADSSTRAVPS
PVSISAATRHRTEQLLASQRDDFNRQNAASRRALMDLAARAQALSLHPLNEKVCGAAGDV
PCAESPCGGAGCRDENGGRRCGGLSCGGAVSKADSALDRARHAQEELRQAASDMAQLSHK
VAEAKGKADEARLRAQAALDKANQTRARVESSNKELRELISNVKAFLSQEGADPESIEVV
ASRVLELSLPASPAQIHRLAEEIKTRVRSLASVDAILEQTAGDVHQAGQLLQDAQQARSR
AEGVRGTAEAVRQALEEARRAQGMAEQALQQAAGDIQHSERALSMMQTQTGSAEQQLAGA
MEQIGLLDRQTDALKVKRANNSLAATRAQEAASTARDRASEAKQVLEGPLRDRYRTAQEL
VEHRAQGAQQAGSRAQQLREEAAGLLQDAQDKLQRLRVLEEEYERNERVLDAKAAQLGGL
EARMREVLATINQQVQIYNTCQ
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggccctggcccccgattccccccagggttgtgcccgcggcagctgctacccg
gccaccggggacttgctggtggggcgagcagcccgactaagtgccacctccacctgcggg
ctgcgccggcctcagccctattgcatcgtcagccacctccaggaggagaaaaagtgcttc
atctgcgactcgcggcggccctacgatgcccgcaccaacaccaacagccaccgcatcgag
aacgtggtcaccagctttgccccccgccccaagaaagcctggtggcagtcagagaacggt
gtggagcacgtcagcatccagctggacctggaggctgagttccacttcacccacctcatc
atgaccttcaagaccttccgtcctgcggccatgctggtggagcgctcggccgactttgga
cacacctggaaggtgtatcgctacttcgcctacgactgcgctgcctcttttccccatgtc
ccccatgggcccccacgccgcattgatgacattgtctgcgagtcccgctactctgacatc
gagccctccactgagggggaggtcatctaccgcgtgctggaccctgccatccccatccgg
gacccctacagccctgccatccaaaacctgttgcgtgtcaccaacctgcgtgtgaacctc
accaagctgcacacgctgggggacaacctgctggactcacggcgggagatccgggagaag
tactactacgcgctctatgagctggtgatgcgcgggaactgcttctgctacgggcacgct
tctgagtgtgccccactcagcggggcccctgccaccagcgatggcatggtgcacgggcgc
tgtgtctgcaaacaccacacccaggggctgaactgcgagcgctgcgaggacttctaccaa
gacctgccctggcgcccggccgagggctccagcaccaacgcctgtcgccgctgtgactgc
aatgagcactcacggcggtgccactttgacatggctgtgttcctggccacggggaacacc
agtggggctgtgtgtgatggctgccagcacaacaccatgggccgtcgctgtcacctctgc
aagcccttctactacaaggaccccaccaaggacctgcgggaccccgcggtgtgccgagcc
tgcgactgcgaccccgagggttctctggatggtgggctgtgcgacagtgctgatgaccca
gccaggggcctgattgcggggcagtgccgctgcaaggagcacgtggctggaccccgctgt
gaccgctgcaaacctggcttcttcggcctcagcaccaacaacccacagggctgccggcgg
tgccaatgtgacccccgtggcacggtggctgatggcagccgatgtgaccctgtcagtgga
gagtgcttctgcaagcgactggtgaccgggcacagctgcaaccagtgcctgcccgagcac
tggggactgagccacgacctcccgggctgccggccctgtgactgcgatgtgggaggtgct
cgcaacaacctgtgtgccatggggacagggcagtgccagtgccgcagccatgtgatagga
cgacagtgtgaacaggtggagcctggtttctaccacatcaacctggatcattacacctat
gaggcagaggatgcacggctgcatcagggctcggtggtggagcgtgagccccccacagac
cgtccagcttcctggacagggacaggctttgcccgtatgttggaaggcggctgggtggag
tttcatgtcagtgatgtgcctttctctaccgagtatgatgtggtcatccgctatgagccc
cagcacccagaggcctggcaggaggtggggctgaaggtgctgcgccccagccccgtctct
gctagcagcccttgtggaaacaccatccctgccgatgaccagctctccaccagcctcccc
tccggtgccaggtatgtggtgctgtcccagcccatctgtctggagcagggtatctcctac
accctccgcctggagctgggctgtgctgctgctcggcaggatcccactgccagtgtgctc
atcgattcgctggtgctcctgccccgttactcctcactggagatgttcattgcgggcgac
cccagctccatggagcgccgggagacctttgagcggtaccactgtgcccagcccttccac
actgcagggccctcgcccgtggccaagccctgctccagcctcctgcacagcctctcagcc
ttcctgcatgacggggcgctgccctgcctctgtgatccccaaggctcgctcagcgctgag
tgtcagccccagggcgggcagtgccagtgcaaacccaatgtcatgggacggcgctgtcac
cgctgttccccgggaaccttcggctttgggcctggcgggtgccgaccatgccagtgcagc
cgtgagggttcagtgagcaccatctgcgacagcaccacagggcagtgcccctgtcgtgag
ggcacccatggcccacgctgtgaccgctgccagcctggccactggggtttccctgtctgc
cggccctgccagtgcaacgggcatgctgagaattgcgaccctcggacaggcagctgcctg
cgctgccgtgaccacacagatggtgaaaggtgccagaggtgcgcagccggacactttggg
aacccagcgctgggctccgggcagcactgccggccctgcccctgtcctgaggggcccagc
accccccgccactttgctgcctcctgctaccaagacagccgctcccaacaggtcgtctgc
cactgcagccctgggtacacaggttctcgctgtgatgagtgtgcccctggctactatggg
gaccctctgcagggtgggcgctgcctgccctgccagtgccacgataacatcgatgtgacg
gacccagaggcgtgcgaccggcgcacagggcagtgcctgcgttgcctctacaacacagca
gggccccactgtgctgagtgccaacccggcttctatggagatgccacacgacacagctgc
aggcgttgctcctgcaaccccctgggcactgaccccagcacctgtgggccgcagcagtgc
cactgtgacaggcacagcgggcagtgccactgcctgccccatgtggagggccagagctgt
gaccgctgcagccccaacttctggaacctggccagtgggcagggctgccagccttgcgcc
tgccaccctcagcactccctgacacccacctgcaaccagttcacagggcagtgctcctgc
cggccaggctttgggggccggacatgcaccgactgccaggagcaccactggggcgaccca
cggcagcagtgccgagcctgcgactgtgacccccgtggtatagccagtgcccagtgccac
cgcagcagcggccactgtgactgccggcctggcatctctggagtccgctgtgaccagtgt
gcccggggctttgctggtaccttccctgcctgccagccctgccacccctgcttcggggac
tgggaccgtgtggtgcaggatctggccacccgcacccgagcactggcacagcgggccagc
ctcctgcagcacaccggggctgctggcgcctttgagggcaccttccgacgactggaggag
aacctggccactgtacgtgatgtggtggccacccgcaacgccactgctgctaccgctgcc
cacttgacacacgccatggaggggctgcggcggcagatcgaggaggcaactgagaggctg
acacgggtggaaggggaactgacagctgctcaggatgccaacttcaatgccagccatgtg
ctgaacactgtggaccgaggcgcccgtgccctcaaccacagcctgcagtacttggaacag
cagctgcatgccctcaagacctccaatttccttggtgcctatgacagtattcgccagtcc
tatggggagtcacgggaggccgagcaccaggcagactcctccacccgtgccgtgcccagc
cctgtcagcatctcggcagccacccgtcaccgcactgagcagctcctggccagccagcgg
gatgacttcaatcgccaaaatgcggccagccggcgggcactgatggacctggcagcaagg
gcacaggcactgagcctgcacccgctcaacgagaaggtctgcggtgcagcgggtgatgtg
ccctgtgctgagagcccttgtgggggtgccgggtgccgggatgagaatgggggacgacgt
tgtggcggtctgagctgtggtggagccgtgtccaaggctgacagtgccctggaccgggca
cgccatgcccaagaggagctgcgtcaggctgccagcgacatggcccagctctcccacaag
gtggcagaggccaaggggaaggcagatgaggcccggttgcgagcgcaggcagccctggac
aaggcgaaccagaccagggcgcgtgtggagagctccaacaaggagctgagggagctaatc
agcaatgtcaaggccttcctgagccaggagggggctgatcctgagagcatcgaggtggta
gccagccgggtactggagctgtcacttcccgcttcaccggcccagatccaccgcctggcc
gaggagatcaagacacgggtgcgcagcctggccagtgtggatgccatcctggagcagacg
gctggtgatgtgcatcaggctgggcagctgctgcaggatgcccagcaggccaggtcacgt
gcagagggagtgcggggcacagctgaggcagtgcggcaggcactggaggaggcgcggcga
gcccagggcatggctgagcaggcactgcagcaagctgccggtgatatccagcacagcgag
agagcccttagcatgatgcagacccagacaggaagtgcagagcagcagctggcgggtgcc
atggagcagattgggctcctggacaggcagactgatgcccttaaggtgaaacgtgccaac
aacagcctggcagccacacgtgcccaggaggcagccagcactgcgcgggaccgagccagc
gaggccaagcaggtgctggaggggccacttcgggaccggtaccggacagcacaagagctg
gtggagcaccgggcgcagggcgcgcagcaggcgggcagccgggcacagcagttgcgggag
gaggccgcagggctgctgcaggacgcccaggacaagctgcagcggctgcgagtgctggag
gaggagtacgagcggaacgagcgggtgctggacgccaaagcagcccagctgggcgggctg
gaggccagaatgagggaggtgctggccaccatcaaccagcaggtccaaatctacaacacc
tgccagtga
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